Pseudocercospora fijiensis: MYCFIDRAFT_79666
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Entry
MYCFIDRAFT_79666 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCFIDRAFT_79666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_79666
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MYCFIDRAFT_79666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
19341616
NCBI-ProteinID:
XP_007929994
JGI:
79666
UniProt:
M2ZJF4
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MASAAPPATPQRPVPGNFINTPAPQQQQKRPGQTIFGPQAESLRERAAPSQSANVPTQSP
SSTKETLAQKAAKSIDLTLQWEEQFPQLENYIAQGISGEYEQPTNQALQPFQEQKTYELP
QRVLAQMNDAQMAVLMGIFAPLGHAWIALDNCLYLWDYTAANPDIIGYEDAPQPITAVRL
VPPKPGVFVEDIKHMIVVCTQHEMLLLGTAKSVNANGAPTVNLYDTKMKINISGINVTNI
VASRKTGRIFFSGEHSDDIYEFHYQQEEGWFSGKCQRINHTSGSIGSQLTSRITAVGSLF
SPASPSKSFKQIVIDDSRNLLWTLSKASEIRVWHVNDPNSLTPGLMRPLASLLQNAGGLF
QSRTDLLTGRDVHLVSLSVLLAAETTKLALMASTNTGCRLYLSVTRGYGFQADAQNPPSS
IQISHIRFPARDPNAPVNPAQSRQTALAPYQQPSGPSSQVDSTSTYLLGIETAYRFPPGY
WMAYQRDPNNPTRNRKVFCVATDTGRLKMQRDVNMTSPFIEYGQWIPVSDELYEIAELTD
PFGATKQPVGFGNELAVQFDQRSAEFAIVTASGIQTIRRRRLVDMFASLMKYGSKDEEGT
EGDIKRFIRTYGRGETAATALAVACGQGVDMDGTRIATVSDPEVLEKARKVFVEYGGSPE
YNANAVVADNRAPEEDVKPSPRFEGISIFVARLARSVWRSKIIVDNPKPGFNGPRFVPGV
SLDKLKDLQRYLTSLLGFLDRNRTFIDGMSGPSTLSRVKTRQEEIALRGEHSYMHGMLNL
IESINEGISFVVVLFDERIEDILALLHEESRRRALDLTFQALFVSPEGRDLAKELVKAIV
NRNISNGSNVDTVAEALRRRCGSFCSADDVVIFKAQEAIKRATETGAQSEPGRALLNESQ
RLFQKCAASLSDEYLKRAVEDYVSAAFYAGAIQLCLTVANEKDKAKRAWAWMKDGALDAD
PRRDSAYAPRRRAYELIFAVITHLDAATANAPELEEDGKRSLAQKRRTEAYDIINNSDDY
AFLTDLYDFYINIQNQPDRLLAITNPFVVEYLRKKSSEHSNGSRLYADLLWRYFSHYNDY
LQAATVQLDLARCDIDIPLDERIEYLSLARANASTRQTIITDSRQSKQRLLREVSDLLDI
AEVQQELLERLRAETRIQDPERKQQLVDALNGQILPVERLFMDYAEAAKYHDICILLYKV
ADHRNPGDIKASWMQLIRDTSAETIAVHGKKLKAWEAVGMTVHSLGRRLGTSPSTFPVNT
LLPLLEEYAIEPRQEHPPDTWAIDLMLDLEIPAETLLPVVETMYYSNAHPWNSASKKRKL
AEKMVYLVQRWFADSERSGERALFGSEENLSLVMECLNSLARDNSSGQEGREGALRMYR
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgctgcgccgccggcgacacctcagcggccggtgcctggcaatttcatcaac
actccggcgccgcaacagcagcagaaacgtccaggccagacaatatttggccctcaagct
gagtcgctgagggagagagcagcgccgtcacagtctgcgaatgtgcccacacagtcgccg
agctcgaccaaggagacactggcacaaaaagcagccaaatccatcgatttgacgctgcaa
tgggaggagcagttcccgcagctggagaactatatagctcaaggcatcagtggagagtat
gagcagcccacaaatcaagcgctacagcctttccaggagcagaagacatatgagcttcca
cagcgcgtactggctcaaatgaatgatgcacagatggcagttctgatgggcatatttgcg
cctctggggcatgcatggattgcgcttgacaattgcttatatctctgggactacactgca
gccaatcccgatattattggatatgaagatgctcctcagcccatcactgccgtacgactc
gtgccaccaaaaccgggtgtttttgtggaagacatcaagcacatgattgttgtttgcaca
cagcatgagatgctgctgcttggtactgccaagtccgtcaatgccaatggcgctcccact
gtcaacttgtacgacaccaagatgaagatcaatattagtggcatcaatgtcaccaatatt
gtcgcatccaggaagactggtcgcatcttcttttctggcgagcacagcgatgacatttac
gaattccactatcagcaggaggaaggctggttcagtggaaaatgtcagagaatcaatcac
acctcgggcagcattggcagtcagctcacgagccgtattaccgccgtgggctcactgttt
agtcccgcatcaccatcaaagtctttcaagcagatagtcattgacgactcccggaatcta
ctgtggacgctgagcaaggcaagcgagatacgagtctggcacgttaacgaccccaactct
ctcacgccaggtttgatgcgtcccttggcttcgctacttcaaaatgcaggcggcctcttc
caaagcaggacagacttgctcaccggcagagatgtgcatcttgtctcactcagtgtgctt
ttggccgcagagacgacgaagcttgcccttatggcctcaaccaatactggatgtcgactc
tacctctccgtcacacgcgggtacggctttcaagcagatgcccaaaatcctccctccagc
attcagatctcccatatccgctttccagcaagagaccccaacgcacctgtcaatccggca
cagtcccgccaaacggcactggcaccataccagcaaccatcaggcccatcaagccaagtc
gacagtacatctacatatcttctagggatagaaacagcatatcgctttccgccgggctac
tggatggcgtatcagagagatcccaacaaccccactcgaaatagaaaagtgttttgcgtt
gcgaccgacaccggccgtttgaaaatgcagagagacgtcaacatgacaagcccgttcatc
gaatatggccagtggattccagtaagcgacgagttgtatgagattgcggagctgacggat
ccatttggcgctacaaagcagcctgttggcttcggcaacgaacttgcagtgcagttcgac
caaagatctgctgaatttgccatcgtaacggcatccggtatccagactatacgtcggaga
cggctggtcgacatgtttgcatcgttgatgaagtacggctcgaaggacgaggaaggcacg
gaaggcgacatcaagcgatttattcgtacttatggtcggggcgaaacagctgcgactgct
ctcgcagttgcatgtggccagggcgttgacatggacggcactcgcatcgctactgtttcg
gatcctgaagtgctcgagaaggcacgaaaggtctttgtcgaatacggtggcagcccggaa
tacaatgccaacgctgttgtcgctgacaatcgcgcgcctgaagaggatgtcaaaccgagc
ccgcgatttgaaggtatctcgatcttcgtggctcgactagcccgttcggtctggcggtcc
aagatcatcgttgacaaccccaagccaggattcaacgggcccagattcgtgccaggcgtc
agccttgataagctcaaggacctccagcgctatctgacctctctcctcggcttcttagat
cgcaatcgcaccttcatcgatggcatgtctggtccatccacactcagccgcgtcaagacc
cgacaagaagagatcgcccttcgtggtgagcacagctacatgcacggcatgctcaatctg
attgagagcatcaacgaaggcatcagcttcgtggtcgtcttattcgacgagcgtattgag
gatatacttgcactgctacatgaagaaagccggagaagagcgctcgatttgactttccaa
gctctatttgtcagtcctgaaggcagagacctcgcaaaggagctagtgaaggccatagtc
aatcgcaacatctccaacggcagcaatgtcgacactgtcgcagaagcactgcgccgaaga
tgtggcagcttctgtagcgctgacgatgttgtcatcttcaaggcacaagaggcgatcaag
cgagcgacagagaccggtgctcagagtgagcctggtcgcgcattgctcaacgagagtcag
cgcctattccagaaatgcgctgcaagcttatccgatgaatatctcaagagagctgtcgaa
gactacgtgagtgcggccttctacgctggtgccattcaactctgcttgacagtggccaac
gagaaagacaaggcaaagagagcatgggcatggatgaaggatggcgcattggacgccgac
ccgagaagagacagcgcatatgcaccccgtcggagagcatatgagctgatcttcgccgtc
atcactcatcttgatgcagcaacagccaatgcgccagaactcgaggaggatggaaagcgt
tctctggctcagaagagacggactgaggcatacgacatcatcaacaactctgacgactat
gcattcctcactgacctctacgacttctacatcaatatccaaaatcagcccgaccgactc
cttgcaatcacaaatcccttcgtcgtggagtacctccgcaaaaagagctcagaacacagc
aacggctcaaggctttatgcggatctcctttggcgatacttcagccactataacgattac
cttcaggccgccactgtccagcttgaccttgctcggtgtgacattgacattcctctagat
gagcggatagagtatctttcactcgctcgcgcaaatgccagcacgagacagactatcatc
acagattcgagacagagcaagcaacggctcctccgcgaagtctccgacctcctcgacatt
gccgaagtccagcaagagcttcttgaacgcttaagagctgagacacgcattcaagaccca
gagcgaaagcagcagctcgtcgatgccctcaacggccaaatcctcccggtcgaacgcctc
ttcatggactacgccgaagccgccaagtaccacgacatctgtattctcctatacaaagtc
gccgatcatcgcaaccccggcgacatcaaagcgagttggatgcaattaatccgcgacacc
agcgcagaaacaatcgcagttcacggcaagaaattgaaggcttgggaagccgtcggcatg
actgtccactccctaggtcgccgcctcggcacttcgccctccacattccccgtcaacact
ctcctccctctgctcgaagaatacgccatcgaacctcgccaagaacacccgcctgacacc
tgggccatcgacctcatgctcgacctggaaatcccagccgagacactgcttcccgtcgtt
gaaaccatgtactactccaacgctcacccatggaattctgctagtaagaagcggaagttg
gcggagaaaatggtataccttgtgcagagatggtttgcggatagtgagaggagtggtgag
agggcgctgtttggcagtgaggagaatttgagtctcgtcatggagtgtttgaattcgctg
gctagggacaatagttcgggacaggaaggacgagaaggtgcattgaggatgtataggtag
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integrated database retrieval system