Pseudocercospora fijiensis: MYCFIDRAFT_79709
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Entry
MYCFIDRAFT_79709 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03030
DNA replication
pfj03410
Base excision repair
pfj03420
Nucleotide excision repair
pfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCFIDRAFT_79709
03410 Base excision repair
MYCFIDRAFT_79709
03420 Nucleotide excision repair
MYCFIDRAFT_79709
03430 Mismatch repair
MYCFIDRAFT_79709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfj03032
]
MYCFIDRAFT_79709
03036 Chromosome and associated proteins [BR:
pfj03036
]
MYCFIDRAFT_79709
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_79709
DNA replication proteins [BR:
pfj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MYCFIDRAFT_79709
DNA Replication Termination Factors
ELG1-RFC complex
MYCFIDRAFT_79709
Chromosome and associated proteins [BR:
pfj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
MYCFIDRAFT_79709
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MYCFIDRAFT_79709
Check point factors
HRAD17(Rad24)-RFC complex
MYCFIDRAFT_79709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_11
RuvB_N
AAA_16
Mg_chelatase
AAA_assoc_2
AAA_28
SLFN-g3_helicase
AAA_5
AAA_lid_RFC1
AAA_24
DUF815
AAA_19
AAA_14
AAA_7
AAA_2
bpMoxR
ResIII
RNA_helicase
nSTAND6
Parvo_NS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
19341621
NCBI-ProteinID:
XP_007929964
JGI:
79709
UniProt:
M3ANZ3
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MNSFFDNRARQAAAAAKAASSSKDTALTQDNKLQPWVEKYRPKSLDDVAAQDHTVTVLRR
TLQSANLPHMLFYGPPGTGKTSTVLALAKQLYGPELIKSRVLELNASDERGISIVREKVK
DFARMQLSNPPAGPAGEEYRKKYPCPPYKIIVLDEADSMTQDAQSALRRTMETYSKITRF
CLVCNYVTRIIDPLASRCSKFRFKLLDEGNAGRRIEDIARLENVTLEEGVTNTLLRCSDG
DLRKAITFLQSAARLVGAVQASTQPDKKRKRTKVEEDDDDADAMDIDAAPSPPITVQSIE
EIAGVIPNNTIERLTTAMTPKPKSRAPYGPIAQAVEDLVAEGWSATQIVSQLYDKIVLGD
ETVGDGAKNKIMLTFSETDKRLVDGSDEHLTILDLCLQISGMMGQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtttcttcgacaacagagcgcgccaagcggcggctgcagccaaagctgcctcc
tcatcgaaagacacagcgctgacacaggacaataagcttcagccatgggttgagaagtac
cggccgaagtctctcgacgatgtcgccgctcaagatcacacagtcacagtgctccgccga
acgctacagtccgccaaccttccacatatgctcttctatggacctccaggaaccggaaag
acctcgacagtgctggcactggccaagcagctctatggccctgaacttatcaagtccaga
gtgctggaactcaacgcatctgatgagcgaggcattagcatcgtgagagaaaaggtcaaa
gatttcgcgagaatgcagttgtcaaatccgccagcgggaccggcaggagaagagtataga
aagaagtacccttgccctccgtacaagattatcgttctggatgaggcagacagcatgacg
caagacgcacagtcagcgttgcgaaggacaatggagacatacagcaaaatcacccgcttt
tgcttggtttgcaactacgtcacgagaatcatcgacccgcttgcatcgagatgctcgaag
ttccgcttcaagctgctcgacgaagggaacgccggcagacgaattgaggatatagcaagg
cttgagaatgtgaccctcgaggaaggcgtcaccaacaccttacttcgctgtagtgacggc
gatctgagaaaagccatcactttcctacagtctgcagcacgtctagtcggtgctgtgcaa
gcatcaacacaaccagataagaagcggaaacgcacgaaggtggaggaggatgatgatgac
gccgacgccatggatatcgatgctgctccttcgccacctatcacagtccaaagcatcgaa
gagatcgcaggcgtcatccccaacaacacaattgagcgactcacgacggcgatgacaccg
aaaccgaaatcgagagcgccctatggacctatagctcaagcagtggaggacttggtcgct
gaaggttggtcggcaacacaaatcgtctctcaactgtacgataagatcgtgcttggagac
gagacggtgggcgacggtgccaagaacaagataatgctcactttctccgagaccgacaag
agattggtagatggaagcgacgagcatttaaccattctggatctatgcttacaaatatct
ggtatgatgggacaatga
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