KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_81234
Entry
MYCFIDRAFT_81234  CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCFIDRAFT_81234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfj03019]
    MYCFIDRAFT_81234
   03041 Spliceosome [BR:pfj03041]
    MYCFIDRAFT_81234
   03032 DNA replication proteins [BR:pfj03032]
    MYCFIDRAFT_81234
Messenger RNA biogenesis [BR:pfj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     MYCFIDRAFT_81234
Spliceosome [BR:pfj03041]
 Complex A
  U1 snRNP components
   Sm proteins
    MYCFIDRAFT_81234
  U2 snRNP components
    MYCFIDRAFT_81234
 Complex B
  U1 snRNP components
    MYCFIDRAFT_81234
  U4/U6.U5 tri-snRNP components
    MYCFIDRAFT_81234
 Complex C
  U2 snRNP components
    MYCFIDRAFT_81234
DNA replication proteins [BR:pfj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     MYCFIDRAFT_81234
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 19341814
NCBI-ProteinID: XP_007930403
JGI: 81234
UniProt: M3AQT9
LinkDB
Position
Unknown
AA seq 100 aa
MADRRGGGGQRKVLLPPINFIFKLLQQHSTVQIWLYEQLGIRIEGKIRGFDEFMNLVIDD
AVEVKQPGKGETEEDVKDQRREVGQILLKGDNVCLIQSLS
NT seq 303 nt   +upstreamnt  +downstreamnt
atggccgacagacgaggcggcggcggtcagcgcaaagttctgctccctcccatcaacttc
atcttcaagctccttcagcaacacagcacggttcagatctggctctacgaacagctggga
atcagaattgagggcaagatcagaggctttgacgagttcatgaatctagtgatcgacgat
gccgtggaggtgaagcagccagggaagggagagactgaagaggacgtcaaggatcagagg
agagaagttggacaaatactgctcaagggcgacaacgtgtgtctgattcagagcttgtcg
tga

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