Pseudocercospora fijiensis: MYCFIDRAFT_84159
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Entry
MYCFIDRAFT_84159 CDS
T03109
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj00040
Pentose and glucuronate interconversions
pfj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
MYCFIDRAFT_84159
Enzymes [BR:
pfj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
MYCFIDRAFT_84159
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
19342154
NCBI-ProteinID:
XP_007924481
JGI:
84159
UniProt:
M2ZY26
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MHFTTSLALAAIASVASATPATKVARADDGPIGYAAQNGGTTGGAGGTTTTVSALSAFTE
AVTADGAAVIFVKGTIKGNVQTKVASDKSILGIDSSSGLEGVGLYIKDVSNVIVRNLAIS
KVLADTGDCVGIQKSTNVWIDHMDLSSDRDHDKDYYDGLLDVTHAADFVTVSNTYFHDHW
KASLVGHSDSNADEDTGYLHITYANNYWKNVNSRAPSIRFGTAHIFNSYYDTLDTGVNTR
MGAEVLVESTAFTGCKKPILSVDSDTTGTAAVNDVDLGGGTNTAPQGSLTVDYDYTLLGS
ASVKSAVVGVAGNTLTLG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaccacttctctcgccctggcggcgattgcttctgttgcatcggctacacca
gctaccaaggttgctcgggcagacgatggcccaattgggtatgctgcacagaatggcggc
accactggtggcgctggcggtaccacaaccacagtctccgccctgagcgccttcactgag
gctgtcactgctgatggggccgcggtcatcttcgtcaagggaaccattaagggcaatgtc
caaaccaaggttgccagcgacaagtccatcctgggcatcgattcaagctccggcctcgag
ggcgtgggcttgtacatcaaggacgtctcaaacgtcatcgtccgcaacctggccatttcc
aaagtcctggctgacaccggcgattgcgttggtattcagaagagtaccaacgtctggatc
gaccacatggatctttcctccgaccgtgaccacgacaaggactactacgatggtctctta
gatgtcactcacgccgccgactttgtcacagtctcaaacacctacttccacgaccactgg
aaggcttctctcgtcggtcacagtgacagcaatgccgatgaagataccggctaccttcac
atcacatatgccaacaactactggaaaaatgtcaactctcgtgctccttccatccgtttc
ggtaccgcgcacatcttcaactcgtactatgacactctcgataccggtgtcaacactcgt
atgggcgctgaagttttggttgagagcactgctttcactggctgtaagaaacccattctg
agcgtggactccgacaccactggcactgcggctgtcaacgatgttgaccttggtggtggc
accaacactgctccgcaaggctctttgaccgtggattacgactacactttgcttggaagc
gcgagtgtgaagtcggctgttgttggtgttgctggtaacaccctcactcttgggtaa
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