KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_87816
Entry
MYCFIDRAFT_87816  CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MYCFIDRAFT_87816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfj03019]
    MYCFIDRAFT_87816
Messenger RNA biogenesis [BR:pfj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     MYCFIDRAFT_87816
SSDB
Motif
Pfam: Fip1 TFIIF_alpha Cwf_Cwc_15
Other DBs
NCBI-GeneID: 19342623
NCBI-ProteinID: XP_007930818
JGI: 87816
UniProt: M3A209
LinkDB
Position
Unknown
AA seq 354 aa
MEDDEDDFYGGGGNGVKQERHADADEKEEQMDVSEDGSEDDDSDDDVQFTLEKPEGAKAE
PPPGSKAARQQAKIAASAVRDEKAKSGTPAIKSEAQRAGSAAPPTAVKGTLTHNGKEGKD
FPEIRTSKLDVNAIPTWPANGKPITELDIDADLAEHSKPWRLPGTDQTDFFNYGFDEYTW
TQYTIRQQSMSDTINQQKQEDAQMKALFGNAGGDGQAGGMGAMGGMPQGMQPDPQMAKMA
QDMGIPLEFFMQMMQQNGGMPGMGMGMGGQQGQFNQPGGDFGAGQNSVSPQPQAGQGFQP
PSGPSGGGQQGQQGGFNMEGFSPQQIAIMQQEQQGGHMGGGGGGGRGGRRRGRW
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggaggacgacgaggatgatttctacggcggtggggggaacggcgtcaagcaagagaga
cacgcggatgcagacgagaaagaagagcagatggatgtatccgaagatggatccgaggac
gacgatagcgacgatgatgttcaattcacgttagagaagccagaaggcgccaaagcagag
ccaccgccaggttcgaaagcagcgcgacaacaggcgaagattgcagcctcggcggtcagg
gacgagaaagcgaagagtggcacaccagccatcaagtcagaggcacagcgagcaggctcg
gcagcacctcccactgccgtcaaaggcacactgacacataatggcaaggaagggaaagac
ttccccgagatccgcacaagcaagcttgatgtgaacgcaataccaacgtggccagcgaac
ggtaaaccgatcacagagctcgatatcgacgccgatctcgccgaacactccaagccttgg
agattgccaggtaccgaccagaccgactttttcaactacgggttcgatgagtacacatgg
acgcagtataccatcaggcaacagagtatgtcggacacgatcaaccagcagaagcaggag
gatgcccagatgaaagctctgttcggtaacgctggtggtgatgggcaggcaggaggcatg
ggtgcaatgggaggaatgcctcagggcatgcagcccgaccctcagatggcgaagatggca
caggacatgggaattccccttgagttcttcatgcagatgatgcagcagaatggcggcatg
ccaggcatgggcatgggcatgggaggacaacaagggcaattcaatcagccaggcggagac
tttggcgcgggtcagaatagtgtcagcccgcagccacaggcaggtcaaggcttccaacca
ccatcagggccaagcggcggcggccagcaaggccagcaaggcggtttcaacatggaagga
ttcagtccacagcaaattgccatcatgcagcaagaacagcagggtggacatatgggtggt
ggcggtggaggagggcgcggggggcgacgccgaggacgttggtga

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