Pseudocercospora fijiensis: MYCFIDRAFT_97432
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Entry
MYCFIDRAFT_97432 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_97432
Spliceosome [BR:
pfj03041
]
Common components
Common spliceosomal components
General mRNP proteins
MYCFIDRAFT_97432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
DUF8065
RRM_7
RRM_10
RBD_DEAH11
PHM7_cyt
RRM_occluded
RRM_5
Preseq_ALAS
RE_TdeIII
Motif
Other DBs
NCBI-GeneID:
19342942
NCBI-ProteinID:
XP_007923646
JGI:
97432
UniProt:
M3BAK1
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
SRNDPLRLDRPDDGLRDRRGRSSKDRYMSEREENDERRARRSKDIADEDAGNGGSDKASA
NGSERSRRRSRSPRPEGRRENHRSRDRLDRAGGDYYRGGGRTSLDDDRYRPRERDDRRPR
DRDDRRGGRDRHCERRPSPHRGTKRKTPEPTDDERDRRTVFVQQLAARLRSRELKEFFQQ
VGDVVDAQIVKDRVSGRSKGVGYVEFKEEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQ
ARNTEGTATQSNGIPFHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAGRSKGYG
FVQFIDPAQAKEALEKMNGFELAGRPIRVGLGNDKFTPESTNSLLQRFGAQAQQAHNFQG
SQFSGMGGRGAHAGGTGNFDRPAARDVDKTGGASALDDTDVGGVNFSNYSRDALMRKLAR
TDEPEQKMAPKTQQKKPVVEQAAATRCVLIKNMYDQNTETDPNWQKELKEDVKGECEAKY
GKVVHIDLALDNNDGEVYVKFDRVQGGENAFKGLNGRWFGGRMLTAQYVVDAVYHMNFPK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
tcgcgcaacgatccactgcgcctcgaccgtccagatgatggactacgcgaccgtcgagga
cgatcctccaaagacaggtatatgagcgagagggaagagaatgacgagcgcagggcccgc
agatccaaagatatcgccgacgaagacgcaggcaacgggggcagtgacaaggccagtgct
aacggaagcgagcgcagcaggcgtcgaagccgctccccacgaccagagggtcgccgcgaa
aaccatcgctctcgcgatcgcctagaccgcgcaggtggagactactaccgtggcggtggc
cgcacgtctcttgacgatgatcgttaccgaccacgtgagcgcgacgatcgtcgacctcgg
gatcgcgacgaccgacgtggtggccgcgaccgacactgcgagcggagaccatcgcctcac
cgtggaaccaagcgtaagacgccagaacctactgatgatgagcgcgacagacgcacagtt
ttcgtgcagcagcttgctgcccgtcttcgctcacgcgaattgaaagagttcttccagcaa
gtcggcgatgtggttgatgcgcaaattgtgaaggatcgtgttagcggccgctccaaaggt
gttggttacgtcgagttcaaagaagaggagtcagtccaaaaggccattcaactcaccgga
cagaaattattgggcatccctatcatcgctcagcttaccgaagcagaaaagaaccgacaa
gctcgcaacaccgaaggaactgccactcagtccaacggcattccattccaccgcctctac
gtcggcaacattcacttctctattacagaggatgacttgaagaacgtctttgagcctttc
ggcgagcttgagttcgtgcaactgcagaaagaggaggccggtcgctccaagggctatggc
tttgtgcagttcatcgaccccgctcaagcaaaggaagcgctcgagaaaatgaacggcttc
gagcttgctggtcgacccatccgtgtgggtctcggtaacgacaagttcactcccgagtcc
accaattccctccttcagcgctttggcgctcaggctcaacaagcacacaatttccagggt
tcccaattctccggcatgggtggtcggggtgctcacgctggtggtacaggcaacttcgac
aggccagctgctcgcgatgtcgacaagactggcggagcgtccgcacttgacgacaccgac
gtcggcggtgtcaacttcagcaactacagccgtgacgctctcatgcgcaagctggcccga
actgacgaacctgagcagaagatggcaccaaagactcaacagaagaagcctgtcgtcgag
caggcagctgccactcgctgtgtcttgatcaagaatatgtatgatcagaacactgagacc
gatccaaactggcagaaagaactcaaagaagacgtcaaaggagaatgcgaggcaaagtat
ggcaaggttgtccacattgacttggctctagacaacaatgacggcgaggtctacgtcaaa
ttcgaccgcgttcaaggtggcgagaacgccttcaaaggcctcaacggtcgctggttcggc
ggacgcatgttgactgctcaatacgtggtcgacgccgtctaccacatgaactttccgaag
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