Pseudomonas frederiksbergensis: PFAS1_00300
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Entry
PFAS1_00300 CDS
T04786
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_00300
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PFAS1_00300
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
A_deaminase
HTH_38
MerR
DUF3853
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
APV37857
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Position
63102..64106
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AA seq
334 aa
AA seq
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MSNIREVARLAGVSVATVSRTLKSPERVLPETRDKVNAAVEKAGYRPNLMAVQFRSRRTG
NLVILVPAIANTFFARVISGAQQAAQAAGYRLLLCDTQGREEIEREFAELVYAHQADGVI
QLRAYDPFEAPFPSAELPPIVNACEMIQGGRHPTISLDNRAAAKAMTEHLIELGHRRIGL
IKGPKSSPLTRDRVAGYQDALRQAGIASDPALICHGDFSLKAGDDGAATMLELTDRPTAL
FCENDEMAIGALKRIKQQGLRVPEDISLVGFDDIPFAAYCDPPLTTIAQPAEVFGQKAVE
MLIALIEKKPIAQRHVVLPFELTLRNSTARVNER
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaatatccgtgaagttgcccggcttgccggcgtctcggtggccacggtctccaga
acgctgaaatcgcctgagcgcgtgctccccgaaacacgggacaaggtcaacgccgccgtg
gaaaaagccggttatcggccgaacctgatggcggtgcagtttcgctcgcgcaggacgggc
aatctggtgattctggtcccggccatcgccaacacgtttttcgcccgggtgatcagcggt
gcccaacaggctgcccaggccgccgggtaccgactgctgctgtgcgacacccagggccga
gaggaaatcgaacgggaattcgccgagctggtgtacgcccatcaggccgatggcgtgatt
cagctgcgcgcctacgacccttttgaagcgcccttccccagcgccgagttaccgcccatc
gtcaacgcctgcgagatgattcaaggcggccgccatcccacgatcagcctcgacaaccgc
gcagcagccaaggccatgaccgagcatttgatagaactgggccatcgccggattggtctg
atcaagggcccgaaaagcagcccgctgacccgcgatcgtgtggccggttatcaggacgca
ttgcgccaggccggcatcgcgtccgatcccgctctcatctgccacggtgatttcagtttg
aaggcaggtgatgacggtgccgcaacgatgctggagctgaccgaccgtcccaccgcgctc
ttttgcgaaaacgatgaaatggccatcggcgcgttgaagcgcatcaagcagcagggcttg
cgggtacccgaggatatttcactggtgggcttcgacgacattcccttcgcagcctattgc
gatccccccctgacgaccatcgcgcaacccgccgaagtcttcggccagaaagccgtcgaa
atgctgattgccttgattgagaagaaaccgattgcgcaacgtcatgtggtattgccgttt
gaactgacgttgcgcaatagcaccgcaagggtcaacgagcgctga
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