Pseudomonas frederiksbergensis: PFAS1_01100
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Entry
PFAS1_01100 CDS
T04786
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFAS1_01100
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfk01007
]
PFAS1_01100
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_01100
Enzymes [BR:
pfk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PFAS1_01100
Amino acid related enzymes [BR:
pfk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PFAS1_01100
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFAS1_01100
Prokaryotic type
PFAS1_01100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FmiP_Thoc5
Filament
Motif
Other DBs
NCBI-ProteinID:
APV38002
UniProt:
A0A1H5FP97
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All DBs
Position
complement(202901..204181)
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AA seq
426 aa
AA seq
DB search
MLDSKLLRSNLQDVADRLASRGYTLDVARIEALEEQRKTVQTRTEALQADRNARSKSIGQ
AKQRGEDIAPLMADVERMANELSAGKVELDAIQTDLDSILLGIPNLPHESVPIGDDEDGN
VEVRRWGTPTAFDFPVQDHVALGEKFGWLDFETAAKLSGARFALLRGPIARMHRALAQFM
INLHTSEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADLYLIPTAEVSLTN
IVAGEIVDSKRLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSTSMEA
LEGLTANAEKVLQLLELPYRTIALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGD
FQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPDVLKPYMG
GLEVIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattccaaactgttacgtagcaaccttcaggacgtagcggaccgcctggcatcc
cgtggttacacgctggatgttgcgcgcatcgaagcgctggaagaacagcgcaagaccgtc
cagacccgcaccgaagcactgcaggctgaccgtaatgcgcgctccaaatccatcggccag
gccaagcagcgcggcgaagacatcgcgccgctgatggcggacgtcgagcgcatggcgaat
gaattgagcgccggtaaagtcgagctggacgcgatccagaccgatctggattcgatcctg
ctcggcatcccgaacctgccgcacgaatccgtaccgatcggtgatgacgaagacggcaac
gtcgaagtgcgccgttggggcacaccgaccgcgttcgatttcccggttcaggaccacgtc
gccctgggcgagaaattcggctggctggacttcgaaaccgccgccaagctgtccggcgcc
cgtttcgccctgttacgcggcccgattgcgcgtatgcaccgcgccctggcgcagttcatg
atcaacctgcacaccagcgaacacggttacgaagaggcctacacgccttatctggttcaa
gcgccggcgttgcaaggcacgggtcagttgccgaagttcgaagaagacctgttcaagatc
actcgcgaaggtgaagccgatctgtacctgattccgaccgccgaagtgtcgctgaccaac
atcgtcgctggcgaaatcgtcgattcgaaacggctgccgatcaagttcgtcgcccacacg
ccatgctttcgcagtgaagccggtgcctcgggtcgcgatacgcgcggcatgattcgtcag
caccagttcgacaaggttgaaatggttcagatcgttgagccgtcgacctcgatggaagcg
ctggaaggcctgacggccaacgccgaaaaagtcctgcaattgctcgaactgccttatcgc
actattgcgctgtgcactggcgacatgggcttcagcgcggtcaagacctacgacctggaa
gtgtggatcccgagccaggacaaataccgcgagatttcgtcgtgctccaactgcggcgac
ttccaggctcgccgcatgcaagcacgtttccgtaacccggaaaccggcaagcctgaactg
gttcacaccctgaacggttccggcctggcggtcggtcgtaccctggtggcggtgctggaa
aactatcagcaagccgacggttcgatccgtgtgccggacgtgctgaaaccgtacatgggt
ggcctcgaggtcatcggctaa
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