Pseudomonas frederiksbergensis: PFAS1_01110
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Entry
PFAS1_01110 CDS
T04786
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PFAS1_01110
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_2
AAA_14
nSTAND3
ATPase_2
Sigma54_activat
AAA_30
ResIII
AAA_18
AAA_28
AAA_3
AAA_33
ABC_tran
RsgA_GTPase
AAA_24
IstB_IS21
Transposase_20
AAA_17
RNA_helicase
Sigma54_activ_2
Cdc6_lid
bpMoxR
TsaE
DUF815
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
APV38004
LinkDB
All DBs
Position
complement(204571..205893)
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AA seq
440 aa
AA seq
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MDLFRSAPIAQPLAARLRAANLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGK
TTLARLLAEVSDAHFETVSAVLAGVKEIRQSVEIAKQQAGQYGRRTILFVDEVHRFNKSQ
QDAFLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVHRALTEER
GLGKRQLTLSDEGFQMLLSAADGDGRRLLNLLENASDLAEDNSEIGVDLLQSLLGDTRRR
FDKGGEAFYDQISALHKSVRGSNPDGALYWFARMIDGGCDPLYLARRVVRMASEDIGNAD
PRALSLCLAAWEVQERLGSPEGELAVAQAITYLACAPKSNAVYMGFKAAMRSATEHGSLE
VPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPEELEPQPFYQPVPRGLELKI
GEKLNHLAQLDRLSPRQRRK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtttcgcagtgccccgatagctcaacctttggcagcacgcctgcgtgcggcc
aacctggacgagtacgtcggtcaggaacacctgctcgctcgcggcaagcctttgcgcgag
gcgctggagcagggtgccttgcactcgatgattttctggggcccgccgggtgtgggcaag
accaccctggcgcggctgctggcggaagtctcggatgcgcacttcgaaacggtttcggcg
gtactggccggcgtgaaggaaatccgtcagtcggtggaaatcgccaagcagcaagccggg
caatacggccggcggaccatcctgtttgtcgacgaagtgcaccgcttcaacaagtcccag
caggacgctttcctgccgtacgttgaagacggcacgctgatttttatcggcgccaccacg
gaaaacccctcattcgaactcaacaacgcgttgctctcccgggcgcgcgtctacgtgctc
aaaagtctcgacgaagcggccctgcgcaagctggtgcatcgcgcgctgacggaagagcgt
ggcctgggcaagcggcaactgaccctcagcgatgaaggcttccagatgttgctgtcggcc
gccgatggcgatggccggcgtctgctcaacctgctggaaaacgcctcggacctggctgaa
gacaacagcgagatcggcgtcgatctcctgcaaagcctgctcggtgatacccgccggcgt
ttcgacaagggcggcgaagcgttttacgaccagatttccgcgctgcataaatccgtgcgc
ggctccaaccccgacggcgcactgtactggttcgcacgaatgatcgacggcggttgcgat
ccgttgtacctggcccggcgcgtggtgcgcatggccagcgaagacatcggtaacgcagac
ccccgcgccctgagcctgtgcctggcggcgtgggaagtgcaggaacgccttggcagccct
gaaggcgaattggcggtggcccaggccatcacctatctggcttgcgcgccgaaaagcaac
gcggtgtacatgggtttcaaagccgcgatgcgcagcgccaccgaacacggttcattggaa
gtgccgctgcacctgcgcaacgcgccgaccaagctgatgaagcaactcggttatggcgac
gaataccgttacgcccacgatgagccggacgcttacgccgctggcgaagactatttcccg
gaagaactcgagccgcaaccgttctatcagccagtgccgcgtggcctggagctgaagatc
ggcgagaagctcaatcaccttgcgcaacttgaccgtctcagcccccggcagcggagaaaa
tag
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