Pseudomonas frederiksbergensis: PFAS1_01170
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Entry
PFAS1_01170 CDS
T04786
Name
(GenBank) isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00020
Citrate cycle (TCA cycle)
pfk00480
Glutathione metabolism
pfk00720
Other carbon fixation pathways
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01120
Microbial metabolism in diverse environments
pfk01200
Carbon metabolism
pfk01210
2-Oxocarboxylic acid metabolism
pfk01230
Biosynthesis of amino acids
pfk04146
Peroxisome
Module
pfk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfk_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFAS1_01170
09102 Energy metabolism
00720 Other carbon fixation pathways
PFAS1_01170
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PFAS1_01170
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFAS1_01170
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PFAS1_01170
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GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
APV38015
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All DBs
Position
217495..219720
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIVEAFTASADIAVETRDISLAGRILASFPEQLGDK
AVADHLAELGDLAVTPEANIIKLPNISASVPQLQAAIKELQAQGFALPDYPETVTSDADK
LAKSRYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAKDSKSHVAHMSTGD
FYGSEKAALIDAADAVKIELIAQDGTTTVLKEKTTVQAGEILDCAVLSKNALRSFIAAEI
EDAKAKGVLLSVHLKATMMKVSDPIMFGQIVAEFYKDALAKHADVLAQIGFNLNNGIGDL
YARIKALPAEQQAQIEADIQAVYAVRPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKLHGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQIKADGVVRVTDSKGGLLLEQPVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
ATPAIFWLDPMRAHDGVVIEKVQAYLKDHDTSGLDIRIMSPVDAMKFTLDRTREGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEENFLR
WDSLGEFLALAASLEHLGVTYNNPKALVLAKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLALYWAQALAAQTEDTALQAQFGELAKTLTENEATIVAELNAVQGKPVDIGGYYHANA
ELISKAMRPSNTFNAAIAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctataccttcaccgacgaagctcccgccctcgccacc
tattcactgttgcctatcgtagaggccttcaccgcctccgctgatatcgccgtggaaacc
cgcgatatctctcttgcagggcgcatcctggccagcttccccgagcaactgggtgacaaa
gccgtagccgaccacctcgccgaactgggcgacctggccgttacgcctgaagccaacatc
atcaagctgccgaacatcagcgcctcggttccgcaactgcaagccgcgatcaaggaactg
caagcccagggcttcgcactgcctgactacccggaaaccgtgaccagcgacgccgacaag
ctcgccaagtcgcgttatgacaagatcaagggcagcgccgtgaacccggttctgcgcgaa
ggcaactccgatcgtcgtgcaccgctgtcggtcaagaactacgcgcgcaagcacccgcac
aaaatgggcgcctgggccaaagactccaagtcccacgttgcgcacatgagcaccggcgat
ttctacggtagcgaaaaagctgccctgatcgacgccgctgatgccgtcaaaatcgaactg
atcgctcaagacggcaccaccaccgtcctgaaagaaaaaaccaccgtgcaagccggtgag
atcctcgattgcgccgttctgagcaaaaacgcgctgcgcagcttcatcgcagccgagatc
gaagacgccaaagccaaaggcgtgctgctgtcggttcacctcaaagccaccatgatgaag
gtctccgacccaatcatgttcggccagatcgttgccgagttctataaggacgcactggcc
aagcacgctgacgtgctggcgcagatcggcttcaacctgaacaacggcatcggcgacctg
tacgctcgcatcaaagccctgccggccgagcaacaagcgcagatcgaagcggacatccag
gcggtctacgccgttcgtccgtcgttggccatggtcaactccgacaaaggcatcaccaac
ttgcacgtgccgagcgacgtgatcgtcgacgcctcgatgccagcgatgatccgtgactcc
ggcaaaatgtggggcaccgacggccagctgcacgacaccaaggctgtgatcccggatcgc
tgctacgccaccatctaccaggcggtaatcgaagactgcaagctgcacggcgctttcgat
ccaaccaccatgggcagcgtgccaaacgttggtctgatggcgaaaaaagccgaagagtac
ggctcgcacgacaagacgttccagatcaaggccgacggtgttgtccgcgtgaccgacagc
aaaggtggcctgctgctggagcaaccggttgaagccggcgacatcttccgcatgtgccag
accaaagacgcgccgatccaggactgggtcaaactggccgtcaaccgcgctcgcgcaagc
gccactccagcgatcttctggctggacccgatgcgcgcccacgacggtgtagtgatcgag
aaagttcaggcttacctgaaggatcacgacacctccggtctggacattcgcatcatgtcg
ccagtcgacgcgatgaagttcaccctggaccgcactcgcgaaggcaaggacaccatctcg
gtgaccggcaacgtattgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtcgatcgttccgctgatgaacggcggtggcctgttcgaaacc
ggcgccggcggttcggcaccgaagcacgttcagcagctgctggaagagaacttcctgcgc
tgggattccctgggtgagttcctggccctggccgcttcccttgagcacctgggtgttacc
tacaacaaccctaaagcgctggtgctggccaagaccctggaccaggccaccggccagttc
ctggacaacaacaaatcgccatcgcgcaaagtcggcaacatcgacaaccgcggcagccac
ttctacctagcgctgtactgggcacaagccctggccgcccagaccgaagacactgcactg
caagcgcagtttggcgaactggccaagaccctgaccgagaacgaagcaaccatcgttgcc
gagctcaacgccgttcagggcaagccagtggacatcggcggttactaccacgccaatgcc
gaactgatcagcaaggccatgcgcccgagcaataccttcaacgccgcgatcgctgcgctg
gtttaa
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