Pseudomonas frederiksbergensis: PFAS1_01180
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Entry
PFAS1_01180 CDS
T04786
Name
(GenBank) tRNA 2-thiouridine(34) synthase MnmA
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PFAS1_01180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_01180
Enzymes [BR:
pfk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
PFAS1_01180
Transfer RNA biogenesis [BR:
pfk03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PFAS1_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Asn_synthase
ATP_bind_3
DUF7411
Motif
Other DBs
NCBI-ProteinID:
APV38017
LinkDB
All DBs
Position
220438..221583
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AA seq
381 aa
AA seq
DB search
MRDPAPSDTQKKRVIVGMSGGVDSSVSALLLIEQGYEVEGLFMKNWEEDDGTEYCTAMDD
LADAQAVCDKIGIKLHTANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLDY
AMMLGADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIAKTLFPVGELEK
PEVRAIAEKHELATAKKKDSTGICFIGERRFSDFLKQYLPAQPGEIKTTEGEVIGRHHGL
MYHTIGQRQGLGIGGLKDASDEPWYVLIKDLVNNELIVGQGNDHPYLFSRALLASDIYWV
NPIDLSEPRRLTAKVRYRQSDQPCTLEKTATGYRATFDDPQRAVTPGQSVVFYDGEICLG
GGVIEVAEPWTSKGTPQGEQQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatccagccccttctgacacacaaaagaagcgcgtcattgtcggcatgtccggc
ggcgtggactcttccgtttccgctctcctgctgatcgagcagggttatgaggtggaaggc
ctgttcatgaagaactgggaagaagacgatggaacggaatactgcaccgccatggatgac
ctggcggacgctcaggccgtgtgcgacaagattggcatcaagctgcacaccgccaacttc
gccgccgagtactgggacaacgtgttcgagcacttcctggccgaatacaaggccggccgc
acgccgaacccggacatcctgtgcaaccgcgagatcaagttcaaggcgttcctcgactac
gccatgatgcttggtgccgacctgatcgccactggccactacgtgcgacgccgcgatatc
gatggccgtaccgagctgctcaagggcctggacccgaacaaggaccagagctacttcctg
cacgccgtgggcggcgaacagatcgccaagaccctgttcccggtcggcgagctggaaaaa
cccgaagtgcgcgcaattgccgagaagcatgaactcgccaccgcgaagaaaaaggattcc
accggaatctgctttatcggcgaacgtcgcttcagcgatttcctcaagcaatacctgccg
gcccagccaggcgagatcaagaccaccgaaggtgaagtcatcggccgtcaccacggcttg
atgtaccacaccatcggccagcgtcagggcctgggcattggcggtttgaaagacgccagt
gacgagccgtggtacgtgctgatcaaggatctggtcaacaacgagttgatcgttggccag
ggcaatgatcacccgtacctgttctcccgcgccctgctcgcctcggacatctattgggtc
aacccgatcgacctgagcgaaccgcgccggctgaccgccaaagtccgctatcgccaaagc
gatcagccctgcacgctggaaaaaaccgccaccggctaccgcgcgaccttcgatgacccg
caacgcgcggtcaccccaggccagtccgtggtgttctacgacggtgaaatctgcctcggc
ggtggcgtgatcgaagtcgcggagccgtggaccagcaaaggcactcctcaaggcgagcag
caatga
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