Pseudomonas frederiksbergensis: PFAS1_01365
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Entry
PFAS1_01365 CDS
T04786
Name
(GenBank) type I secretion protein TolC
KO
K15725
outer membrane protein, heavy metal efflux system
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_01365
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_01365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
APV38051
LinkDB
All DBs
Position
complement(263522..264793)
Genome browser
AA seq
423 aa
AA seq
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MPGLRELTARSRLKKTAWVVMVSGGLLLAGAPFANASTLTLDQALQTAFAGNPDLAAAQW
EIGIAEGDRQQAGLIPNPEVSWEAEDTRRDSRTTTVMLSQPIELGGKRGARIDVASRAQD
AAGIELQRKRNVLRADVIQAFTSAQTAQQRVQLSRQSLQLAEHGLRVALGRIEAGKSSPV
EGTRAQVQRSEVRLELSRAERDQANAYQQLAQVMGAPLPTSTTVQTATQSMPAVPPPTRL
LERLNETAELQLATLQIDQREASLGLEKAQRIPDLTVSIGSQYSEQERERVNVVGLSMPI
PLFNRNQGNVLAAARRTDQARDLRNATELRLRTEIQTTLEQWQTANGEVQAFNQTILPAA
QRAVDSATRGFEMGKFGFLDVLDAQRTLISARTQYIQAVAEATDARVRIERIFGDLGALA
VSP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
ttgcccggtttaagagaactgacggcgcggtcacgcctgaaaaaaacggcgtgggtggtc
atggtcagcggcggtttgttgctggccggcgcgccttttgccaatgcatcgaccctgacc
ctcgatcaggccctgcaaaccgcattcgccggcaacccggatctggcagcggcgcaatgg
gaaatcggcatcgccgagggtgaccgccagcaggccggtctgatccccaaccccgaagtg
tcgtgggaagccgaggacacccgccgcgattcgcgcaccaccacagtgatgctcagccag
ccgattgaactgggcggcaagcgcggcgcgcggatcgatgtcgccagccgcgcccaggac
gccgccgggatcgaactgcagcgcaagcgcaatgtcttgcgcgccgatgtgattcaggcg
ttcaccagcgcccagactgcgcagcaacgcgtgcagttgtctcgccagtcgctgcaactg
gccgagcacggattgcgcgtggcgctggggcggatcgaggcgggcaagtcgtcgccagtc
gaaggcacacgggcgcaagtgcaacgctccgaagtgcgactggaactgagccgcgccgaa
cgggatcaggccaacgcctatcagcaactggcgcaggtcatgggcgcaccgttgccgact
tcgaccaccgtgcagacggccacgcaaagcatgcccgccgtgccgccgccgacccgcttg
ctggagcgcctgaacgagaccgccgagctgcagctggccacgttgcagatcgatcagcgc
gaggcatcgttgggactggagaaggcgcaacggattcccgacctgaccgtgagcatcggc
agtcagtacagcgaacaggagcgcgagcgggtcaacgtggtcgggctgtcgatgccgatt
ccgctgttcaaccgcaatcagggcaacgtgctggcggcagcgcgccgtaccgatcaggcg
cgggatctgcgcaacgccaccgagctgcgcttgcgcaccgaaatccagaccacccttgag
caatggcagaccgccaacggcgaagtccaggcgttcaaccagaccatcctgcccgccgca
caacgtgcagtggacagcgccacgcgcggcttcgaaatgggcaagttcggtttcctcgac
gtgctcgacgcccagcgcaccctgatcagcgcccgcacccaatacatccaggccgttgcc
gaggcgacggacgcgcgggtgcgcatcgaacgcattttcggcgacctcggcgcactcgcc
gtcagcccttga
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