Pseudomonas frederiksbergensis: PFAS1_01920
Help
Entry
PFAS1_01920 CDS
T04786
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00280
Valine, leucine and isoleucine degradation
pfk01100
Metabolic pathways
Module
pfk_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PFAS1_01920
Enzymes [BR:
pfk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
PFAS1_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
MCC_alpha_BT
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
HlyD_D23
GARS_A
ATP-grasp_3
ATPgrasp_ST
PTS_EIIA_1
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
APV38155
UniProt:
A0A1P8EPT5
LinkDB
All DBs
Position
378176..380131
Genome browser
AA seq
651 aa
AA seq
DB search
MSAPVLTTLLVANRGEIACRVMRTAKALGLTTVAVHSATDREARHSREADIRVDLGGSKA
ADSYLQIDKLIAAAKASGAQAIHPGYGFLSENAGFARAIEEAGLIFLGPPASAIDAMGSK
SAAKALMETAGVPLVPGYHGEAQDFDTFRDACARIGYPVLLKATAGGGGKGMKVVEDVSQ
LAEALASAQREAKSSFGDSRMLVEKYLLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ
KVVEEAPAPGLSPELRRAMGEAAVRSAQAIGYVGAGTVEFLLDSRGEFFFMEMNTRLQVE
HPVTEAITGLDLVAWQIRVARGEALPMTQDQVPLIGHAIEVRLYAEDPGNDFLPATGRLE
LYRESTQGPGRRVDSGVEEGDEISPFYDPMLGKLIAWGEDREQARLRLLSMLDEFAIGGL
KTNINFLRRIVGHPAFAAAELDTGFIPRYQEELLPVASDLSDEFWQAAAQAFTQSQPRTT
RADDPVSPWANSNGFRAGLPTEITLHLSCEDQDRALTLGDADAHTAQLKGEQLLTEHNGL
RRQHRAIRRGEVLYLQWEGELRRIESYDPISAIEASHSHHGGLTAPMNGSIVRVLVEAGQ
TVEAGAQLVVLEAMKMEHSIRAPHAGVIKALYCQEGEMVSEGSALVEFEDA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacctgttctcaccaccctgctggtggccaaccgcggcgaaatcgcttgccgg
gtgatgcgcaccgccaaagccctgggcctgaccaccgtcgccgtgcacagcgccaccgac
cgtgaagcccgacacagccgcgaagcggatatccgcgtcgacctcggtggcagcaaagcc
gccgacagttacttgcaaatcgacaaactgatcgccgccgccaaggccagtggcgctcag
gcgattcatcccggttatggctttctttccgaaaacgccgggttcgcccgcgccatcgaa
gaagcgggactgattttcctcggcccgcccgcctcggccatcgatgcgatgggcagcaaa
tccgcggccaaagccttgatggaaaccgccggcgtgccattggtgcccggctatcacggt
gaagcgcaggacttcgacacgttccgcgacgcctgcgcacgcatcggttatccagtgctg
ctcaaggccaccgcaggcggcggcggcaaaggcatgaaagtggtcgaggacgtcagtcag
ttggccgaagccctggcctcggcccaacgtgaagcgaaatcctcgttcggtgattcgcgg
atgctggtggaaaagtacctgctcaaaccgcgtcacgtggaaatccaggttttcgccgac
cagcacggcaattgcctgtacctcaacgaacgtgattgttcgatccagcgtcgccaccaa
aaagtcgttgaagaagcacccgctccaggcttgagcccggagctgcgtcgcgccatgggt
gaggccgccgtgcgttcggcacaggccatcggttatgtcggtgccggcaccgtggaattt
ctgttggattcgcggggtgagttcttcttcatggagatgaacactcgcctgcaagtcgaa
cacccggtcaccgaagccatcaccggcctcgatctggtggcctggcagattcgcgtggcc
cgcggcgaagcgctgccgatgactcaagatcaggttccgctgatcggccatgccatcgaa
gtgcgcttgtatgccgaagacccgggcaacgatttcctgccggcgaccggtcgactggag
ctgtatcgcgaatccacgcaaggtccgggacggcgggtagacagcggcgtcgaggaaggc
gatgaaatttcaccgttctacgacccaatgctcggcaaactgattgcctggggcgaggat
cgtgaacaggcgcgactgcggctgctgagcatgctcgatgagttcgccattggcggactc
aagaccaacatcaacttcctgcgccggatcgtcggccatccggcgtttgctgcggccgaa
ctggataccgggttcattccgcgttatcaggaagagctgctgccagtcgcctcggacctc
agtgacgagttctggcaagccgccgcccaggcttttacccaaagccagccgaggacaact
cgtgccgatgacccggtttcgccttgggccaacagcaatggtttccgtgctggactgccg
acagaaatcaccctgcatttgagttgtgaagaccaggatcgcgcgctgacgttgggcgac
gccgacgcccacaccgctcaactcaagggtgagcaactgctgaccgagcacaacggcctg
cgccgccagcatcgggcaatccgccggggcgaggtgctgtatctgcaatgggaaggtgaa
ctgcgccgcatcgagtcctacgacccgatcagcgccatcgaggccagccacagccatcac
ggcgggctgaccgcgcccatgaatggcagcatcgtgcgggtattggtggaagccgggcaa
acggtcgaagccggggcgcagttggtggtgctggaggcgatgaagatggaacacagcatt
cgtgcaccacacgccggggtgatcaaggcgctgtattgccaggaaggcgagatggtcagc
gaaggcagtgcgttggtcgaatttgaagacgcatga
DBGET
integrated database retrieval system
