KEGG   Pseudomonas frederiksbergensis: PFAS1_02020
Entry
PFAS1_02020       CDS       T04786                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PFAS1_02020
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfk02044]
    PFAS1_02020
Secretion system [BR:pfk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PFAS1_02020
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF5635 DUF6791
Other DBs
NCBI-ProteinID: APV38174
LinkDB
Position
398389..399813
AA seq 474 aa
MHNDKESPFTLTLLDGDLSLQVLQFSGREALNQPYRFDIEVIGLAPAMNLDRLLQQPVFL
SLMEGQGIHGVLHSASREHRGPHRIGYKLVLVPYLQWLDRQRSRRVFHHLSVPMILRQLL
EEHDVPEASYRFELSSGHYPVRPFCIQYEESDLALLQRLCEEEGIHYHFEHQREGHVLVL
ADDSLSFPQDPVLTPFQGNAPEDSDGPTISELFQRHDSPPIPSRLEARNRGSHKPDDGAA
NHAFSKPLPVMVRPAPEHIHHDQLSRRQLERLRCQYLQIHGQSNQSALRSARIVQVSEHP
LANFNDQWLLTETRHQGQQPSILATDKPVTVGHYRNQFTAIPWSTVFRPALKQTRPSIPG
YQPAQVLGPAGQPPALDDQGRIQVRLWPTAQADPLESVGIWLPVAFAAPDGRIDASSLPK
AGSDVLISFLDSDPDRPVLCIGMGHHPRTRPDPEPRRDSDLLLDWLVNRSDPSP
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgcacaacgacaaggaaagccccttcaccctgacacttctcgacggcgatttgagtttg
caggtgttgcagttcagtggtcgagaagccctcaaccagccctatcgattcgacatcgaa
gtgatcggcctcgcaccggccatgaacctcgaccgactgctgcaacaaccggtgttcctc
agcctgatggagggccagggtattcatggcgtacttcacagtgccagtcgcgagcatcgc
ggcccacaccggatcggctacaaactggtgctggtgccctaccttcaatggctcgaccgg
cagcgttcacgccgggtctttcatcacctcagcgtaccgatgatcctgcgccaactgctg
gaggaacatgatgtgcccgaggcgagctatcgcttcgaattatccagcggacactatccc
gtccggcctttttgcattcagtacgaggagagcgacctggcattactgcaacggctgtgc
gaagaagaaggcattcactatcacttcgaacatcagcgcgaagggcatgtgctggtcctg
gcagatgacagcctgagcttcccccaggaccccgtccttacgccattccagggcaacgcg
cccgaagacagtgacgggccgacgatcagtgagttgttccaacgccatgactcgccgccc
attccctcacgactggaggccaggaaccgtggctcgcataaacccgacgatggcgcggcc
aaccacgcgttcagcaaaccattgccggtcatggtccgccccgcgcccgagcacatccat
cacgatcagttgagccgacgacaactggaacgtctgcgttgccagtacctgcagatccac
ggtcaaagcaaccagagcgcactgcgcagtgcacggatcgtgcaagtgtcagaacatcca
ctggcgaatttcaacgatcagtggctgctcaccgaaacccgacatcaagggcaacaacct
tcgattcttgccaccgacaaaccggtcactgtcggtcattaccgcaatcagttcaccgcc
attccctggtcaacggtattcaggccggcactcaaacagaccaggccgagcatcccgggt
taccagcccgcccaggtactgggccctgccgggcaaccgccggcgctggatgatcaaggt
cgaatacaagtcaggctgtggccaaccgcgcaagcggatccgcttgaatctgtgggtatc
tggttaccggtggcctttgcagcgccggacggtcggattgatgcgtccagcctgccaaag
gccggcagcgacgtgctgatcagttttctcgacagtgacccggaccgaccggtgctgtgt
atcggcatgggccatcacccgcgcacccggcctgatcccgagccacgccgcgatagcgat
ttgctgctcgattggctggtcaatcgctcggacccatcgccctga

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