Pseudomonas frederiksbergensis: PFAS1_02210
Help
Entry
PFAS1_02210 CDS
T04786
Name
(GenBank) protein CapI
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00053
Ascorbate and aldarate metabolism
pfk00520
Amino sugar and nucleotide sugar metabolism
pfk01100
Metabolic pathways
pfk01240
Biosynthesis of cofactors
pfk01250
Biosynthesis of nucleotide sugars
Module
pfk_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
PFAS1_02210
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PFAS1_02210
Enzymes [BR:
pfk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
PFAS1_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
adh_short
NAD_binding_4
KR
NAD_binding_10
SP_0191-like
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
APV38208
LinkDB
All DBs
Position
complement(435918..436895)
Genome browser
AA seq
325 aa
AA seq
DB search
MTVLVTGAAGFIGYHTVKRLCQEGLEVVGIDNLNGYYSVELKHARLNELKNLSGFHFQAL
DIVDKPALMALFKDHGFTEVIHLAAQAGVRYSLDNPDVYAQSNLTGFLNVLEACRHHRPE
HLIYASSSSVYGTNSKMPFSVEDAVDHPISLYAASKRANELMAHSYCHLFGLKASGLRFF
TVYGPWGRPDMALFKFTDAILNDRPIDLYNQGQMSRDFTYIDDIVESIARLCPRPPLSDG
PGDGANRIFNIGRGTPVALLDFVECLESALDRKARRNFLPLQAGDVVKTWADVSALAQWV
DFRPQVTVEAGVAEFVKWYSHFYQR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtactggtcaccggcgccgccggtttcatcgggtatcacacggtcaagcgcttg
tgtcaggaaggtcttgaggtggtcggtatcgacaatctcaacggctactacagcgtggaa
ctcaaacacgcacggctcaacgaactcaagaatctgtcgggctttcatttccaggcactg
gatatcgtcgacaaaccggccttgatggctttgttcaaggatcacggcttcacagaggtt
atccatctggctgcccaggcgggcgttcgctactcgctggacaacccggacgtgtatgcg
caatcgaacctgaccggtttcttgaatgtgctggaagcctgccggcaccatcgccccgag
catctgatttatgcatcgagcagttcggtgtacggcaccaacagcaaaatgccgttcagc
gtcgaagacgctgtcgatcatccgatttcgttgtatgccgccagtaagcgtgccaacgag
ctgatggcccacagctattgccatctgtttggactgaaggccagcggcctgcgttttttt
accgtttacggaccttgggggcgccccgacatggcgctgttcaaatttaccgacgcgatc
ctcaacgacaggccgattgacctctacaaccaaggccagatgtcgcgcgacttcacctac
atcgacgacatcgtcgaaagcattgcgcgcctgtgcccgagaccgccgttatcggacggt
cctggcgatggcgccaaccggatcttcaacatcgggcgcggcacgccagtggcgctgctg
gatttcgtcgagtgtctggagtcggcattggacaggaaagcccggcgcaacttcctgccg
ctgcaggctggcgatgtggtcaaaacctgggcggatgtgtcggcattggcgcagtgggtc
gatttccgtcctcaagtgacagttgaagccggcgtagccgaatttgtgaagtggtacagc
cacttttatcagagataa
DBGET
integrated database retrieval system