Pseudomonas frederiksbergensis: PFAS1_03085
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Entry
PFAS1_03085 CDS
T04786
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02020
Two-component system
pfk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFAS1_03085
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFAS1_03085
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pfk01001
]
PFAS1_03085
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfk02022
]
PFAS1_03085
Enzymes [BR:
pfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PFAS1_03085
Protein kinases [BR:
pfk01001
]
Histidine kinases
Other
PFAS1_03085
Two-component system [BR:
pfk02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
PFAS1_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
IFT57
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
APV38373
LinkDB
All DBs
Position
612592..614913
Genome browser
AA seq
773 aa
AA seq
DB search
MDIKFTNRLSYKQARLTVLVGFILGTLLSLLQIGIDYASEDASINREILSLLEISHNPAS
RIAYNIDAELAQELTLGLLRSPAIIGAQLIDNNSTVLANVKRPGVQSGYRVISDFLFGAN
RQFEDRLYLDHLPTESLGILRLDVDTYSFGNRFLRRAEVTLLNGFARSLLLTGILLALFY
VMLTKPLVRVIRELSSRDPRSAESTSLECPTDHENDEIGVLVKVANQQFENIATEIQQRR
NAENRLTDYLGQLENIVSARTAELKAINSRLSQSNEELEVARSTALDMAEARSVFLANMS
HEIRTPLNGLLGMIALSLDGPLNAEQQQQLSIAHDSGKVLVELLNDILDLSKFDAGQLEL
EHIPFDLGSLIEDTANLLSQNAAPSVELSCLIDPQFPALVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSTFEDGVRIEVCDTGIGIAQDAQVKIFQPFTQAGAGITRQFGGTGLGLA
LTYNLCEAMQGRLTISSEAGFGSQFCADLPLPSHTRALPPASLRGKVIAITAASSGLAEL
LSSVLPGWGLDYEQRSIDDSLLGVNPDVLITDCPECLFGLRPSCTAPILLVTAYGSFMPS
EEALALAPLQQQARPLARNALYQTLRRTLQPELSTINGARLDVLSPQRRGRVLLVEDNPV
NQLVAKGMLGKLGCEVIVAGHGGEALDQLEQSEFDLVLMDCNMPVMDGYEASRQIRRSGR
WPQLPIVALTANAMSEERERCRAAGMSDYLAKPFRREELAALLDLWVPTTTVL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaagttcaccaaccggctgtcctacaagcaagccaggctgactgtgctggtc
ggtttcattctgggcacgctgctcagcctgctgcaaataggcatcgattatgccagtgaa
gacgcctccatcaaccgcgaaatcctgtcgttgctcgaaatcagccataaccccgcgtcc
cgcattgcctacaacatcgacgccgaactcgctcaggaactgaccctgggcctgttgcgc
tcgccggcgatcatcggcgcacaattgatcgacaacaacagtaccgtgctggccaacgtc
aaacgcccgggggtgcaaagcggctatcgggtgatcagcgacttcctgttcggcgccaat
cggcagttcgaagaccgtctctacctggatcacttgccgacagaatccctcggtatcctg
cggctggacgtcgacacctattcattcggcaaccgctttctgcgtcgggccgaggtgacc
ctgctcaatggcttcgcgcgcagcctgctgctaactggcatcctgctggcgctgttctac
gtgatgctgaccaagccgttggtgcgggtgatccgtgaactcagcagtcgcgacccgcgc
agcgcggagtcaacgtcgctggagtgtccgacggaccatgaaaacgatgaaatcggtgta
ctggtcaaggtggccaatcaacaatttgaaaacatcgccaccgaaatccagcagcgacgc
aacgcggaaaaccgcctgaccgactacctcgggcaactggagaacatcgtctcggcccgc
actgcggaactcaaggcgatcaactcgcggctcagccaatccaacgaggaactggaagtc
gcccgcagcaccgccctggacatggccgaagcgcgctcggtgttcctggccaacatgagc
cacgagatccgcacgccgctcaatggcctgctggggatgatcgcgctttccctggacggt
ccgctcaatgccgagcaacagcaacagctgtccatcgcccatgactcgggcaaagtgctg
gtggaactgctcaacgatattctcgatctgtcgaagttcgatgccggccaactggagctc
gaacatattccgttcgatcttggctcgctgatcgaagacaccgccaacctgctatcgcaa
aacgccgcgccgagtgtcgagctgagctgcctgatcgacccgcagttcccggccctggtc
ctgggggatccgacgcgagtccgacagatcgtcagcaacctgttgtccaacgccctcaaa
ttcacccgtttcggtcgggtcgatgtgcgcctgtcgacattcgaggacggcgtcagaatc
gaagtctgcgacaccggcatcggtatcgcccaggatgcccaggtcaagatcttccagccc
tttacgcaagcgggtgccggcattacccggcaattcggcgggaccgggctgggtctggca
ctgacctataacctctgcgaagccatgcaagggcgcctcaccatcagctcggaagcaggc
ttcggcagtcagttctgtgccgatctgccgctacccagccacacccgcgcccttcccccg
gcctctttacggggcaaggtcatcgcaatcaccgccgccagcagcggtctggccgaactg
ttgagcagtgttttgcctggctggggactcgactatgagcagcgttccatcgatgactcg
ttgctgggtgtgaacccggatgtactgattaccgattgccccgaatgtctgtttggcctg
cgtccttcgtgtacagcccccattctgctggtcaccgcgtatggcagtttcatgcccagc
gaagaagccctcgccctcgcccccttacagcaacaggcgcgacctctggcacgcaacgcg
ctgtaccagacgctaaggcgaaccctgcagccggaactcagcacgatcaacggtgcccgg
ctcgacgtcctctccccacaacgacgcgggcgcgtgctgttggtggaggacaatccggtc
aaccaactggtggccaaggggatgctcggaaaactcggttgcgaggtgattgtcgccggt
cacggtggtgaggcgctggatcagctggagcaaagcgaattcgatctggtgctgatggac
tgcaacatgccggtgatggacggctacgaggccagtcggcaaatccgtcgcagcgggcgt
tggccacagctgcccatcgtcgccctgaccgccaacgccatgtccgaggagcgcgaacgc
tgccgtgcggctggcatgagcgattacctggcaaaacccttccgccgggaagagctggct
gccctgctggacttatgggttccgactacgacagtgctttga
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