Pseudomonas frederiksbergensis: PFAS1_03230
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Entry
PFAS1_03230 CDS
T04786
Name
(GenBank) recombination-associated protein RdgC
KO
K03554
recombination associated protein RdgC
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfk03400
]
PFAS1_03230
DNA repair and recombination proteins [BR:
pfk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PFAS1_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
APV38395
LinkDB
All DBs
Position
639495..640415
Genome browser
AA seq
306 aa
AA seq
DB search
MWFKNLLIYRLTQDLPFDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHIS
GDFLLIAARKEERILPGSVVRDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAF
IRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGTLPVRPLTVKMSPTATMTEWV
TTQKAADDFFVLDECELRDTHEDGGIVRCKRQDLTSEEIQLHLSTGKVVTQLSLAWQDKL
SFVLDDKMVVKRLKFEDLLQDQAEQDGGEEALGQLDASFTLMMLTFGDFLPALVEALGGE
ETPQGI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcaaaaacctgcttatctatcgcctgacccaagatctgccttttgatgccgag
gcgttggaaactgcactggcgaccaaactggcgcgtccatgtgcaagccaggagttgacc
acctacggtttcgtcgcgcccttcggcaagggcgaagatgctccgctggtgcacatcagc
ggcgacttcctgctgatcgctgcccgtaaagaagaacgcattctgccgggcagcgtcgtg
cgcgatgcggtaaaggaaaaggtcgaagagatcgaagccgaacaaatgcgcaaggtctac
aaaaaagagcgcgaccagatcaaggatgaaatcatccaggccttcctgccgcgggccttt
attcgtcgttcgtcgactttcgctgctatcgcgccgaaacagggcctgatcctggtcaac
tcggccagcccgaaacgtgccgaagacctgttgtccaccctgcgtgaagtcatcggcacg
ctgccggtacgtccgctgaccgtgaagatgtcccctaccgcgaccatgactgaatgggtc
actacccagaaagccgcggacgatttcttcgtgctggacgagtgcgagctgcgcgacacc
cacgaagacggcggcatcgtgcgttgcaagcgccaggacctgaccagcgaagaaatccaa
ctgcacctgagcaccggcaaagtggttactcagctgtcgttggcctggcaggacaagctg
tctttcgttcttgacgacaagatggtggtcaagcgcctgaagttcgaagatctgctgcag
gaccaggcggaacaggacggtggcgaagaagccctcggccaactggacgccagcttcacc
ctgatgatgctgaccttcggcgacttcctgccggcgctggttgaagcgctgggtggtgaa
gagactccgcaggggatctaa
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