Pseudomonas frederiksbergensis: PFAS1_03930
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Entry
PFAS1_03930 CDS
T04786
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_03930
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_03930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
APV38528
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All DBs
Position
775224..777347
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AA seq
707 aa
AA seq
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MSFGSPSPRSPLVLALLFSSPLLADDLFLDSEQLPQVLTATRLKQSPAAVPGSMTVIDSE
LINASGARDISELLRLVPGMMVGNINGNQAAVNYHGTNATEARRLQVLIDGRSVYRAGLA
TVDWSDIPVALEDIERIEVFRGPNTVSYGANALMAVVNILTRNPADSHGTRMKVTRGQRG
IDDFYASQGVGWDGGDLRLSLSGQQDDGFDSERNGADYRDSRRLNRFNLAVSQTLTENQS
IDWQLNAKEGSNQRPYTYRPVFSGITDAGNNSDVIAKDYAGSLRWNLDINPDHSLYVQGS
AQHWDRQQTWRACDAEVSFSPQLTELWQLNPNYTERLARNMERYTGPGAPAGDPTQRALA
NQVLDQWRNGARQTLCGDIDQSTRESRYDLELQDTLSLSDSLRLVSGMNYRYDRANSETY
FNGTLDDTTWRAFGQLEWRATEHWLLQGGAMFEDTQLIGSSLTPRVAVNYLINPRHGLRA
VYSEAIRSPDMFENNVNWSYQVKSLRPGAYGQSSARYFVKTRGPGNLEQEHMRSRELGYN
GYFAEAGLAVDVKLFYDEITGMISEPLRNNQYIASNSNSARFSGAETQLDWRISSADRLR
LTYAYVDAEASNPQDAQQTARNSGSAGWLHNWGHGWNSALFYYGDDALNGYRFERVDTRI
AKRIGLGKASLELAGVLQQRLDNQPTTFVDNNYDERRVLYFSAELAF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtttggctctccatcaccgcgctcgccgttggtactggcactgctcttcagctcg
ccattgctggccgacgacttgttcctcgacagcgagcagctgccgcaagtattgaccgcc
acgcggctcaagcagtcgccggccgcagtaccgggaagcatgacggtgatcgacagcgaa
ctgatcaacgccagtggcgcccgggacatcagcgagttgctgcgactggtgccgggaatg
atggtcggcaacatcaacggcaaccaggcggcggtgaactatcacggcaccaatgcgacc
gaagcgcgacgcctgcaagtgttgatcgacggccgctcggtgtaccgcgcaggcctggcc
acggtggactggagtgacattccggtggccctggaagacatcgaacgcatcgaagttttc
cgcggcccgaacaccgtcagctatggcgccaatgcgctgatggcggtggtcaatatcctc
acgcgcaacccggccgacagccacggcacgcgaatgaaagtaacccgtgggcagcgcggc
atcgacgacttttacgccagccagggcgtggggtgggacggcggcgacctgcgcctgtcg
ctgtccggccagcaagacgacggcttcgactcggagcgtaacggcgccgattaccgcgac
agccgccgtttgaaccgcttcaacctcgccgtcagccagacgctcactgaaaaccagagt
atcgactggcaattgaatgccaaagaggggagcaaccagcggccgtatacctaccgcccg
gtcttctctgggattaccgatgccgggaacaattccgacgtcatcgccaaggactatgcc
ggttcgctgcgctggaacctcgacatcaatcccgatcacagcctttacgtccagggctcg
gcacagcactgggatcgccagcagacctggcgtgcctgcgatgccgaggtttcgttcagc
ccgcagttgaccgaactctggcagctcaacccgaattacaccgaacgcctggcgcgcaac
atggagcgctacaccggccccggcgcgcccgcaggtgacccgacccagcgcgcactggcc
aatcaagtgctcgaccaatggcgcaacggcgcccggcaaaccctctgtggcgatattgac
cagagcacccgggaatcgcgctacgaccttgaattgcaggacaccctcagcctgtccgac
agtctgcggctggtcagcggcatgaactatcgttacgaccgggcaaattccgagacctac
ttcaatggcaccctcgacgacaccacctggcgagcgttcggccaactcgagtggcgcgcc
accgagcattggttgctgcagggcggtgcgatgttcgaagacacgcaattgatcggcagt
tcgctcaccccacgggtggcggtcaactacctgatcaacccgcgccatggcctgcgcgcg
gtgtactcggaagccatccgctcgccggacatgttcgagaacaacgtcaactggagctat
caggtgaagagcctgcgccccggcgcctatggtcagtccagtgcccgttatttcgtcaag
acccgtggccccggcaacctcgaacaggaacacatgcgctcccgggagctgggctacaac
ggctactttgccgaagcggggctggcggtcgatgtaaaactgttctacgacgaaatcacc
gggatgatcagcgaaccgttgcgcaacaatcagtacatcgccagcaactcaaacagcgcg
cgcttctccggggcagaaacccagctcgactggagaatcagcagcgccgatcgcctgcgc
ctgacgtatgcctacgtcgatgccgaggcgagcaacccgcaggatgcacaacagaccgcg
cgaaacagtggttccgccggttggctgcacaactggggccacggctggaacagcgcgctc
ttctactatggtgacgatgccctgaacggctaccgctttgaacgggtcgacacgcgcatc
gctaaacgcatcggcctgggcaaggccagcctggaactggccggtgtgctccagcaacgc
ctcgacaaccagcccacaacgttcgtcgacaacaactacgacgagcgccgagtgctttat
ttcagcgcagagctggcgttctaa
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