Pseudomonas frederiksbergensis: PFAS1_04045
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Entry
PFAS1_04045 CDS
T04786
Name
(GenBank) tRNA 2-thiocytidine(32) synthetase TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_04045
Transfer RNA biogenesis [BR:
pfk03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PFAS1_04045
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Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
NAD_synthase
QueC
DacZ_P
Motif
Other DBs
NCBI-ProteinID:
APV38550
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Position
complement(800386..801210)
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AA seq
274 aa
AA seq
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MGTLTVNQNKLQKRLRRQAGEAVADFNMIEDGDKVMVCLSGGKDSYTMLDVLLHLQKVAP
IKFEIVAVNMDQKQPGFPEHVLPAYLKELGIEYHIVEKDTYSVVKELIPEGKTTCSLCSR
LRRGTLYTFADQIGATKMALGHHRDDIVETFFLNMFFNGSLKAMPPKLRADDGRNVVIRP
LAYCNEKDIQAYSDFKQFPIIPCNLCGSQENLQRQVVKDMLQEWERKTPGRTESIFRSLQ
NVIPSQLADRNLFDFTNLRIDETAASRFVNVVNL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcttacggtcaaccagaacaaactgcaaaagcgccttcgccgccaggctggt
gaggctgttgccgatttcaacatgattgaagacggcgacaaggtcatggtctgcctgtcc
ggtggcaaggacagctacaccatgctcgacgtgctgttgcacttgcagaaggtcgccccg
atcaagttcgagatcgtggccgtgaacatggaccagaaacagccgggtttccccgagcat
gtgctgccggcctatctcaaagagctgggcatcgagtaccacatcgtcgagaaagacacc
tattcggtggtcaaggagctgatcccggaaggcaagaccacctgttcgctgtgctcgcgc
ctgcgtcgcggcacgctctacacctttgccgaccaaatcggcgcgaccaagatggccctc
ggtcatcaccgcgacgacatcgtcgagacctttttcctgaacatgttcttcaacggctcg
ctcaaagccatgccgccgaagctgcgcgccgacgatggccgcaacgtggtgatccgcccg
ctagcctactgcaacgaaaaagacatccaggcctactcggacttcaagcaattcccgatc
atcccgtgcaacctctgcggttcccaggaaaacctgcaacgccaggtggtcaaggacatg
cttcaggagtgggaacgcaagacgccaggccgcaccgaaagcattttccgcagcttgcag
aacgtgatcccgtcgcaactggcggaccgtaatctgttcgacttcaccaatctgcgtatc
gatgaaaccgccgcttcgcgcttcgtcaacgtagtcaacctctaa
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