Pseudomonas frederiksbergensis: PFAS1_04280
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Entry
PFAS1_04280 CDS
T04786
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFAS1_04280
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfk01007
]
PFAS1_04280
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_04280
Enzymes [BR:
pfk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
PFAS1_04280
Amino acid related enzymes [BR:
pfk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PFAS1_04280
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFAS1_04280
Prokaryotic type
PFAS1_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DUF1319
CorA
NNH3
Motif
Other DBs
NCBI-ProteinID:
APV38590
LinkDB
All DBs
Position
complement(848612..851236)
Genome browser
AA seq
874 aa
AA seq
DB search
MKSAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRA
VSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWNFLTSDQWLN
LPKEKLWVTVYASDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPC
TEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLE
RISAVLQHVHSNYEIDLFQSLLSASAKAIGCTNDNQASLKVVADHIRSCGFLIADGVLPS
NEGRGYVLRRIIRRACRHGNKLGAKGSFFYQIVAALVAEMGEAFPELKSQQAHIERVLKA
EEEQFAKTLEQGLKILEQDLADLKGDVVPGDVVFKLYDTYGFPMDLTGDIARERNLTIDE
EGFEREMEAQRVRARSASSFGMDYNSLVKVDVATEFTGYTAHSGSAKIVALYKDGQSVDV
LSEGEEGVVVLNQTPFYAESGGQIGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGSL
IVGAPVETHVDADVRHATSLNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFE
AIKPEQLKALEDIVNAEIRKNSEVETEETDIETAKQKGAMALFGEKYGDSVRVLSMGGDF
SVELCGGIHANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAANLV
KGSRDNLIDKLSAVLERNRLLEKQLEQLQAKAASAAGDDLSASALDVKGVKVLAVRLDGQ
DGKALLALVDQLKNKLGRAVILLGSVHEEKVVLVAGVTKDLTGQLKAGDLMKQAAAAVGG
KGGGRPDMAQGGGTDAGALDAALALTVPFVEQGL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgcagaaatccgtgaagccttccttcgcttcttcgaagagcaaggccacacc
cgtgtagcctccagctctttgattccgggcaacgacccaaccctgctgttcactaacgcg
gggatgaaccagttcaaggactgcttcctgggccaggaaaagcgcgcgtacacccgcgcg
gtcagcagccagaaatgcgtgcgcgccggcggcaagcacaacgacctggaaaacgtcggt
tataccgcccgtcaccacaccttcttcgaaatgctgggtaacttcagcttcggtgattac
ttcaagcgcgatgcgatcacctacgcctggaacttcctgacgtccgaccagtggctgaac
ctgccgaaagaaaagctctgggtcaccgtctacgccagcgatgacgaggcttacgacatc
tggaccaaggaaatcggcgttccggctgaacgcatggttcgtatcggcgacaacaaaggc
gcgccgtacgcgtccgacaacttctggaccatgggcgataccggcccgtgcggtccttgc
accgagattttctacgatcacggcgccgacatctggggcggcccaccgggctcgccggaa
gaagacggcgatcgttacatcgagatctggaacaacgttttcatgcagttcaaccgcacc
gccgatggcgtgttgcacccgctaccagcaccgtcggtcgataccggtatgggcctggag
cggatcagtgccgtgctgcagcacgttcactcgaactatgaaatcgacctgttccagagc
ctgctgagcgcatcggccaaggccatcggttgcaccaacgacaatcaggcttccttgaaa
gtcgtcgccgaccacattcgttcgtgcggtttcctgattgccgacggcgtgctgccgtcc
aacgaaggccgcggctacgtgctgcgccggatcattcgtcgcgcctgccgacacggcaac
aagctgggcgccaagggcagcttcttctatcagatcgttgctgccctggtcgccgagatg
ggcgaagcgttccctgagctgaaatcccaacaggcgcatatcgagcgcgtcctgaaagcc
gaagaagagcaattcgccaagaccctggagcagggcctgaaaatcctcgagcaggatctg
gccgatctcaaaggtgacgtggttccgggcgacgtagtgttcaaactctacgacacctac
ggtttcccgatggacctgaccggcgatatcgctcgcgaacgcaacctgaccatcgacgaa
gaaggcttcgagcgcgaaatggaagcccagcgcgtccgtgcccgttccgccagctccttc
ggcatggattacaacagcctggtcaaggttgatgtggccactgagttcaccggttacacc
gctcacagcggttccgcgaaaatcgttgctctctataaagacgggcaatcggttgacgtg
ctgagcgaaggcgaagagggcgtggtcgttctcaatcagaccccgttctatgcggaatct
ggtggtcagattggtgattgcggcttcctccaggctggcgctgcgcgtttcgacgtgcgc
gacaccaccaagaccggcggtgcgttcctgcaccacggtgtgctggattcgggcagcctg
atcgttggcgctccggtcgagactcatgtcgatgccgacgtgcgtcacgcgacttcgctg
aaccactccgccactcacttgctgcacgccgcattgcgtcaggtgctgggcgatcacgtt
cagcagaaaggctcgttggtcgacagtcagcgcctgcgctttgacttcagccacttcgaa
gccatcaagcctgagcagttgaaggcgctggaagacatcgtcaacgccgagattcgcaag
aactccgaagttgaaaccgaagaaaccgatattgaaaccgccaagcagaagggcgccatg
gcgctgttcggcgaaaaatacggcgacagcgtgcgcgtactgagcatgggcggtgatttc
tccgtcgagctgtgtggcggtatccacgccaaccggactggcgacatcggcctgttgaag
attatcagcgaaggcggtgtggcctccggcgtgcgtcgtatcgaagcggtcactggcgcc
gcggcgctggcatacttgaacgctgctgaagaacaactcaaggaagcggccaacctggtc
aagggtagtcgcgacaacctgatcgacaagctgtcggctgtgctggagcgcaaccgtctg
ctggagaagcagctcgagcagttgcaggccaaggctgccagcgcagcgggcgacgatctg
tcggcttctgccctggatgtcaaaggcgtgaaggtgctggccgtgcgtctggacggtcag
gatggcaaggcgctgctggcgctggtcgatcaactgaaaaacaaactcggccgcgcagtg
atcctgctcggcagtgtccatgaggaaaaggtcgttctggttgcaggcgtaaccaaagac
ctgactggccaactcaaagccggtgatttgatgaagcaagccgctgcggcagtgggcggg
aagggcggtggtcgtccagacatggcgcaaggtggtggtactgacgctggcgcactggat
gcggcattggccctgactgttccatttgtagagcagggtttataa
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