Pseudomonas frederiksbergensis: PFAS1_04455
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Entry
PFAS1_04455 CDS
T04786
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_04455
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PFAS1_04455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_41
TetR_C_24
OSK
HTH_22
HTH_11
HTH_36
LacI
Motif
Other DBs
NCBI-ProteinID:
APV38621
LinkDB
All DBs
Position
889581..890189
Genome browser
AA seq
202 aa
AA seq
DB search
MTAPQRLTDRKREAIIQAAIAEFRANGFDITSMDKIAATAGVSKRTVYNHFPSKEELFAE
ILNQLWARVTAEQETPYRPDLPLREQMRRMLMAKMQMLGDDNFLDLARVAIAATIHSPER
AQNMVCRMGEREEGLTVWIRAAQADGRLKPVAPEFAAQQIQGMLKSFAFWPQISMGLPGL
SAEMQTTVVESALDMFLACYQL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacagctccacagcgcctcactgaccgaaaacgcgaagccatcattcaggcggcgatt
gccgaattccgtgccaacggcttcgacatcaccagcatggacaagatcgccgccaccgcc
ggcgtgtcgaagcgtacggtgtacaaccatttccccagcaaggaagagttgttcgccgaa
atcctcaatcaattgtgggcgcgggtgacggcagaacaggaaacgccctaccgccctgac
ctgccgctgcgcgagcagatgcgccgaatgctgatggcgaaaatgcagatgctgggcgat
gacaattttctcgacctggcgcgggtggccatcgccgccaccatccattcccccgagcgc
gcccagaatatggtgtgccgaatgggtgagcgcgaagaaggcctgaccgtgtggatccgc
gccgctcaggccgatggccgtctgaaaccggtcgcccccgaattcgccgcacagcagatt
caggggatgctcaaatccttcgcgttctggccacagatttccatgggtctgcccggcttg
tcagccgagatgcagaccacggtggtggagtcggcactggacatgtttctggcctgctat
cagctctaa
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