Pseudomonas frederiksbergensis: PFAS1_04610
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Entry
PFAS1_04610 CDS
T04786
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_04610
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PFAS1_04610
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
GshA
Motif
Other DBs
NCBI-ProteinID:
APV38650
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Position
917055..918086
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AA seq
343 aa
AA seq
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MISPKNDKNTRTTGRPTLNEVARLAGVSPITASRALRGVSTVATELVEKVQKAALDLNYV
VNPAARALASAQSHSVVVLVPSLSNLLFIDTLEAIHQVLRPKGFEVLIGNFHYSRDEEEN
LLRNYMAYQPRGLLLTGFDRTESSRRMIEASNIPCVYMMELDSAAGLNCVGFSQLAAGET
AAGHLLSRGRKRLAYIGAQLDQRTLLRGEGFRKALQKAGLYDPDLEVLTPRSSSVGLGGE
LFLQLLASHPDVDAIFFGNDDLAQGALLEAMRCGIKIPEQVAILGFNDLPASAHMVPRLS
SISTPREAIGRRAAEQMLTLMAGNTVAKPVQDMGFELKVREST
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatctcccctaaaaacgataaaaatacgcgcaccactggccgccccactttgaacgaa
gtcgcacgcctggccggtgtcagcccgattaccgcctctcgcgccctgcgcggagtcagc
acggtggccaccgaactggtggaaaaagtgcagaaagccgccctcgacctcaactacgtg
gtcaaccctgccgcccgcgcgttagcctcggcccagagccattccgtcgtggttttggtg
ccttcattgtccaacctgctgttcatcgacacgctggaagccattcatcaggttttgcga
ccaaagggcttcgaagtgctgatcggcaacttccattactcacgcgatgaagaagaaaac
ctgctgcgcaactacatggcgtatcagcctcgcggtttgctgctgaccggtttcgaccgc
accgaaagttcgcgccggatgatcgaggcgagcaacattccgtgcgtgtacatgatggaa
ctggacagcgccgccggcctcaattgcgtgggcttttcgcaacttgctgccggcgagacc
gcagccgggcatttgctgtcacgcggtcgcaagcgtctggcctacatcggcgcgcaactg
gatcaacgcacgttgctgcgcggcgaaggtttccgcaaagccctgcaaaaagccggtttg
tatgacccggacctggaagtgctgacaccgcgttcttcctccgtcggcctgggtggcgaa
ctgttcctgcaactgctcgccagtcatcccgatgtcgacgcgatcttcttcggtaacgac
gacctggcccagggcgcactgctcgaagccatgcgctgcgggatcaagatccccgaacaa
gtggcgatcctcggcttcaacgacctgccggcttcggcccacatggtcccgcgcctgagc
agcatcagcaccccgcgagaagccatcggtcgccgcgcggcggagcagatgttgacgttg
atggccggtaacacggtggccaaaccggtgcaggacatggggtttgagttgaaggtgcgc
gaaagtacctga
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