Pseudomonas frederiksbergensis: PFAS1_04695
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Entry
PFAS1_04695 CDS
T04786
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00061
Fatty acid biosynthesis
pfk00071
Fatty acid degradation
pfk01100
Metabolic pathways
pfk01212
Fatty acid metabolism
pfk02024
Quorum sensing
pfk04146
Peroxisome
Module
pfk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFAS1_04695
00071 Fatty acid degradation
PFAS1_04695
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFAS1_04695
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_04695
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfk01004
]
PFAS1_04695
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfk04147
]
PFAS1_04695
Enzymes [BR:
pfk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFAS1_04695
Lipid biosynthesis proteins [BR:
pfk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFAS1_04695
Exosome [BR:
pfk04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFAS1_04695
Exosomal proteins of breast cancer cells
PFAS1_04695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
APV38667
UniProt:
A0A1H5I8L3
LinkDB
All DBs
Position
complement(931822..933522)
Genome browser
AA seq
566 aa
AA seq
DB search
MIEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAQLVVPKTGVKHVIVTEVADLLPPLKRLLVNSVIKYVKKMVPAYH
LPKAIKFNDVLSKGHGQPVAEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLTAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCKVIDDAGVEQPLGEIGELCVKGPQVMKGYWQ
RQDATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKEQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGVKKVSA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtaccctgccgggattgctgccgagatcaatcca
gacgagtatccgaatattcaggcggtgttgaagcagtcctgccaacgctttgccaacaaa
ccggcgttcagcaacctgggcaagacaatcacctacggtgaactgtacgaattgtccggt
gcctttgccgcttacctgcaacagcataccgacttgcagccgggcgatcgaatcgccgtg
cagctgcccaacgtgttgcagtacccggtcgccgtcttcggtgccatccgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccaattcaacgac
tccggtgccaaagccctggtctgcctggccaacatggcgcacctggcccagctcgtcgtg
ccgaaaaccggcgtcaagcacgtgatcgtcaccgaagtggccgacttgctgccgccgctc
aagcgcctgctggtcaacagcgtcatcaaatacgtgaagaagatggtcccggcgtatcac
ttgcccaaggccatcaagttcaacgacgtattgagcaagggccacggccagccagtcgcc
gaagccaacccggccagcagcgacgttgccgtgctgcaatacaccggcggcaccactggc
gtggccaagggcgcgatgctgacccatcgcaacctggtggcgaacatgctgcagtgcaag
gcgctgatgggttccaacctccatgaaggttgcgagatcctgatcacgccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgatttgacggcgatggtcaaggaactgtcgaagtggaag
ttcagcggtttcgtcgggctcaatacgctgtttgtcgccctgtgcaacaacgaagccttc
cgtaagctggatttctctgcactgaaagtcaccctgtccggtggcatggccctgcaactg
gccgccgccgagcgctggaaagcggtcaccggttgcgccatctgcgaaggttacggcatg
accgaaaccagcccggtggccaccgtcaacccaatccagaacatccagatcggcaccatc
ggcattccggtgccctcgaccctgtgcaaagtcatcgacgatgccggcgttgaacagccg
ttaggcgaaatcggcgagttgtgtgtgaaaggtccgcaagtgatgaagggttactggcag
cgtcaggacgccaccgatgaaatcctcgacagcgaaggctggttgaagaccggtgatatc
gcgctgatccagcctgacggttacatgcgcatcgtcgatcgcaagaaagacatgattctg
gtctccggtttcaacgtgtacccgaacgaactggaagacgtgctcgcgaccctgccgggc
gtgctgcaatgcgcagccatcggcgtgccggacgagaagtcgggcgaggcgatcaagatc
ttcatcgtcgccaaaccgggcgtgacgctgaccaaggaacaggtgatggagcacatgcgc
gccaacgtcaccggctataaagtgccgaaagccgtggaattccgcgatgcgctgccgacc
accaacgtcggcaagatcctgcgccgcgagttgcgcgacgaagagctgaagaagctcggc
gtgaagaaggtcagcgcataa
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