Pseudomonas frederiksbergensis: PFAS1_04700
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Entry
PFAS1_04700 CDS
T04786
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00061
Fatty acid biosynthesis
pfk00071
Fatty acid degradation
pfk01100
Metabolic pathways
pfk01212
Fatty acid metabolism
pfk02024
Quorum sensing
pfk04146
Peroxisome
Module
pfk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFAS1_04700
00071 Fatty acid degradation
PFAS1_04700
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFAS1_04700
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_04700
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfk01004
]
PFAS1_04700
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfk04147
]
PFAS1_04700
Enzymes [BR:
pfk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFAS1_04700
Lipid biosynthesis proteins [BR:
pfk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFAS1_04700
Exosome [BR:
pfk04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFAS1_04700
Exosomal proteins of breast cancer cells
PFAS1_04700
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
APV38668
LinkDB
All DBs
Position
complement(933885..935573)
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDQGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA
AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLPDTDIQYLIEAKMGDLMPTAKGWLVNTLVSKVKKMVPAYS
LPQATSFKSALRLGRGLGIKPLKIGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACLEQFGNDGQPLLREGQEVMVAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIKGFI
KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATAERWEQLTGCR
ITEGYGLTETSPVACTNPYGDKSRLGTVGLPVPGTTLKVINDEGVEQALGERGELCIKGP
QIMKGYWQKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggccggcgtgcccctggacatcgatcaa
ggggcctacaagtcggtgatcgaggtgttcgagcgttcctgcaagaaatttgctgaccgc
ccggcattcagcaacatgggcgtaaccctgacctacgccgaactggaacgctacagcgca
gcgttcgccggttacctgcaagcccacaccgacctggtgccgggggatcgcattgcggtg
cagatgcccaacgtcctgcattacccgattgccgtgtttggagccctgcgagccgggctg
atcgtggtcaataccaacccgctgtacaccgcgcgggagatgcgtcaccagttcaaggac
tccggtgcccgggcgttggtgtacctgaacatgttcgggcagaaagtccaggaagtgctg
cccgacaccgacatccagtacctgatcgaagcgaagatgggcgacctgatgcctaccgcc
aagggctggctggtcaatacactggtgagcaaggtcaagaagatggtgccggcgtactcc
ttgccgcaggccacttccttcaagagcgcgctgcgcctgggccggggcttgggtatcaag
ccactgaagatcgggctcgacgacatcgccgtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgcgatgctgacccacggcaacctggtggccaacatgcagcaagtgcgg
gcgtgcctggagcagttcggcaatgacggccagccgctgttgcgcgaagggcaagaggtg
atggtcgcgccgctgccgctgtaccacatctatgcgttcaccgcgaattgcatgtgcatg
atggtttcgggcaaccacaacgtgctgatcaccaatccacgcgacatcaagggcttcatc
aaggagctgaagaactggcggttctcggcccttttgggactcaacacgctgttcgtcgcg
ctgatggatcacccggatttcaagaccctggatttctccagcctcaaactcaccaactcc
gggggcaccgcgctggtcaaggccacggccgagcgttgggaacagctcaccggttgccgc
atcaccgaaggttacggcctgaccgaaacctcgccggtggcctgcaccaacccctacggc
gacaagtcgcgcctcggcacggtcggcctgccggtgccgggcaccacgctgaaagtcatc
aacgacgaaggcgtcgagcaggcgctgggcgagcgcggcgaactgtgcatcaagggcccg
cagatcatgaagggttactggcagaaacccgaagccaccgccgaagtgctggatgccgag
ggctggttcaagtccggcgacatcgcggtgatcgacccggacggttttgtgcgcatcgtc
gatcgcaagaaagacatgatcatcgtctcgggtttcaacgtgtacccgaatgagatcgaa
gacgtggtgatggctcacccgaaagtcgccaactgtgcggtgatcggggtgccggacgag
cgttcgggggaggcggtgaaactgtttgtggtggcccgtgaaacgggggtcagtcttgaa
gagctgaaggcttactgcaaggaaaacttcacggcgtacaaagtgcccaagcacatcgtc
ttgcgtgagtcgttgccgatgacgccggtgggcaagatcttgcggcgggagttgcgtgat
atcgcctga
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