Pseudomonas frederiksbergensis: PFAS1_05010
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Entry
PFAS1_05010 CDS
T04786
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk01501
beta-Lactam resistance
pfk02020
Two-component system
Module
pfk_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFAS1_05010
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFAS1_05010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_05010
01504 Antimicrobial resistance genes [BR:
pfk01504
]
PFAS1_05010
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_05010
Antimicrobial resistance genes [BR:
pfk01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PFAS1_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
APV38727
LinkDB
All DBs
Position
999311..1000678
Genome browser
AA seq
455 aa
AA seq
DB search
MRVMKWSMIALAVAAAASTQLATAAPFVSDQSEAKGFVEDAKFDLLLRNYYFNRDNKDGS
RDQKDWTQGIWGNLSSGYTQGTVGVGVDAFGYLAVKLDGGDGTSGSGNMSRGAADPNDPR
RIRHANDSQGKAGAAIKARISKTELKFGEMQPSTSPVFAVGGSRILPQTATGFQLQSSEV
KDLDLEAGHFYSASSQDNNSSDGGLYANYAGVEANKIDYFGGKYGITDNLSASLYGAKLE
DIWNQYYANLNYTIPMGSDQSINLDGNIYRTTDTGDAKVGDISNTTFSLAAAYSFLKAHT
ITLGFQKVNGDTPFDYIGVGKNNRGGDSIFLANSIQYSDFNGPNEKSAQIRYDLKMAEYG
VPGLSFMTRYVKGWDIDGTGLAANSQYRNSEGDPLYGADGKHNETNFEAKYVVQTGPAKD
LSFRIRQAWHFANADQGEGDIKEFRLIVDYPLSIL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggcagttgcagcagcagccagtactcaa
ttggctacggccgcaccttttgtaagtgaccagtctgaagccaaaggctttgttgaagac
gcgaaattcgacttgctgctacgcaactattacttcaaccgtgacaacaaagatggcagc
agagaccagaaagactggactcagggcatctggggcaacctcagttccggttacactcaa
ggtaccgtaggcgtcggcgttgatgcattcggttacctggccgtcaaactggacggtggc
gacggcacaagcggctcgggcaacatgtcccgcggcgccgccgatccaaacgatccacgg
cgtattcgccacgccaacgacagccaaggaaaggcaggcgcagccattaaggcccgcatc
tccaaaaccgagttgaaattcggcgaaatgcagccaagcacctcaccagtgttcgctgtt
ggcggctcccggattcttcctcaaacggccactggcttccagctgcagagcagcgaagtc
aaagatcttgacctggaagccggtcacttctattcggcgagcagccaggataacaactcc
agcgatggcggcctgtacgcaaactacgctggcgtagaagccaataaaatcgactacttc
ggtggcaagtacggcatcacagacaacttgagcgcatcgctgtacggcgccaagctggaa
gacatctggaaccagtactacgccaacctgaactacaccatcccgatgggtagcgatcag
tcgattaacctggacggtaacatctaccgcactaccgataccggtgatgcgaaggtaggc
gatatcagcaacaccacgttctccctggcagccgcttactcgttcctgaaagcacacacc
attaccctcggcttccagaaggtcaacggcgacactccgttcgactacatcggtgtaggc
aagaacaaccgcggcggcgactcgatcttcctcgccaactccatccagtactctgacttc
aacggtccgaacgaaaagtctgctcaaattcgttatgacctgaaaatggccgagtacggc
gttcctggtctgagcttcatgacccgttacgtaaaaggctgggatatcgatggcaccggt
ctggctgctaacagccagtaccgcaattccgaaggtgacccgctgtacggtgcagacggc
aaacacaacgaaaccaacttcgaagccaagtacgttgttcagactggccctgcgaaagac
ctctccttccgcattcgtcaagcatggcacttcgctaatgccgaccaaggtgaaggcgat
atcaaagagttccgtctgatcgttgactacccgctgtcgatcttgtaa
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