Pseudomonas frederiksbergensis: PFAS1_05345
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Entry
PFAS1_05345 CDS
T04786
Name
(GenBank) transcriptional regulator ArgP
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_05345
03036 Chromosome and associated proteins [BR:
pfk03036
]
PFAS1_05345
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFAS1_05345
Chromosome and associated proteins [BR:
pfk03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PFAS1_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_AsnC-type
HTH_34
Cro
Sigma70_r4
HTH_24
HTH_50
Motif
Other DBs
NCBI-ProteinID:
APV38789
LinkDB
All DBs
Position
complement(1089726..1090619)
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AA seq
297 aa
AA seq
DB search
MFDYKLLSALAAVVEQAGFERAAQVLGLSQSAISQRIKLLEARVGQPVLVRVTPPAPTEI
GRRLLNHVQQVRLLERDLQTLVPALDEEGLPERLRIALNADSLATWWAAAVSDFCAEQHL
LLDLVVEDQTVGLKRMRAGEVAACICASERPVAGARSVLLGAMRYRALASPAFIARHFPE
GVRADLLSKTPALVFGPDDFLQHRYLASLGVDGGFEHHLCPSSEGFIRLTEAGLGWGLVP
ELQVREQLERGVLVELLPDKPIDVPLYWHHWRNGGQLLGLLTDQLVRSSKQWLVPLD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactataaattgctttctgccttggccgcggtggtcgagcaggccgggttcgaa
cgtgcggctcaggtgctcggcttgtcgcaatcggcgatctcccagcgcatcaaactcttg
gaggcgcgggtcggccaaccggtgctggtgcgggtgactccgccggccccgaccgaaatc
ggccgacggctgctcaaccatgtgcagcaggtgcgtttacttgaacgggacttgcagaca
ctggtgccggcactcgatgaagaaggcctgccggaacgtctgcgcatcgccttgaatgcc
gacagcctcgccacgtggtgggccgcagccgtcagtgatttctgcgccgagcaacacctg
ctgctggatctggtcgtcgaagaccagacggtgggcctcaaacgcatgcgcgctggcgaa
gtggccgcgtgcatctgcgccagcgagcgtccggtggcgggtgcgcgtagcgtgttattg
ggcgccatgcgttatcgagcgttggccagcccggcatttatcgcccggcattttcctgaa
ggtgtgcgcgccgatctgttgtcgaaaacccccgcgttggtgtttggcccggacgatttc
ctacagcatcgctacctcgcgtccctcggcgtcgatggcggattcgaacaccatctatgc
ccctcgtccgaaggcttcatccgtcttacggaagcgggactcggttggggcctggtgcct
gaactgcaggtgcgcgagcaactggaacgcggcgtattggtggagcttttgcccgataag
ccgatcgacgtgccgttgtactggcatcattggcgcaatggcggtcagttgctggggttg
ctcaccgatcagttggtgcgctcgtcgaagcaatggctggtgccgttggactga
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