Pseudomonas frederiksbergensis: PFAS1_05440
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Entry
PFAS1_05440 CDS
T04786
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFAS1_05440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfk03019
]
PFAS1_05440
03110 Chaperones and folding catalysts [BR:
pfk03110
]
PFAS1_05440
03029 Mitochondrial biogenesis [BR:
pfk03029
]
PFAS1_05440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfk04147
]
PFAS1_05440
Enzymes [BR:
pfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PFAS1_05440
Messenger RNA biogenesis [BR:
pfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PFAS1_05440
Chaperones and folding catalysts [BR:
pfk03110
]
Heat shock proteins
HSP60 / Chaperonin
PFAS1_05440
Mitochondrial biogenesis [BR:
pfk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PFAS1_05440
Exosome [BR:
pfk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PFAS1_05440
Exosomal proteins of other body fluids (saliva and urine)
PFAS1_05440
Exosomal proteins of breast cancer cells
PFAS1_05440
Exosomal proteins of colorectal cancer cells
PFAS1_05440
Exosomal proteins of bladder cancer cells
PFAS1_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APV38807
UniProt:
A0A1P8ERF7
LinkDB
All DBs
Position
complement(1110882..1112525)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKALSKPCADTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVILSKENTTVIDGAGVEADIQARVLQIRQQVADTSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAISELKGDNDDQNVGIQLLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIKEDGPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaagtttggcgattccgcccgcaagaaaatgctcgccggtgtc
aacgtcctggctgacgcagtaaaagcgaccctgggccctaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtgtccgttgccaaagaaatc
gaactgaaagatcgcttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgcaggcgacggcaccaccaccgctaccgttctggctcagtcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctcaagcgcggtatc
gacaaagcgaccatcgcaatcgtcaaagagctgaaagccctgtccaagccttgcgctgac
accaaggcgatcgctcaggtcggcaccatctcggccaactccgacagctccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgttgaaggcatgcagttcgaccgtggctacctg
tccccgtacttcgtcaacaagccagagaccatgacggccgagctggacggtccgctgatc
ctgctggtcgacaaaaagatctcgaacatccgcgaaatgctgccagtactggaagccgtt
gccaaagccggccgtccactgctgatcgttgccgaagacgttgaaggcgaagccctggcg
actctggttgtgaacaacatgcgtggcatcgttaaagtcgcagccgtcaaggctcctggc
ttcggcgaccgtcgcaaggccatgctgcaggacatcgctgttctgactggcggtaccgtt
atctccgaagaaatcggtctgagcctggaaagcactaccctggaacacctgggtaatgcc
aagcgcgtgatcctgtccaaagaaaacaccaccgtgatcgacggtgccggcgttgaggct
gacatccaggctcgcgttctgcagatccgtcagcaagtggccgacacttcgtccgactac
gaccgtgaaaaactgcaagagcgtctggccaaactgtccggcggcgttgcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtacctggcggcggcgtggcactggtt
cgcgctctgcaggcaatctccgagctgaaaggcgacaacgatgaccagaacgttggcatc
cagttgctgcgtcgcgctgttgaagcaccactgcgccagatcgttgccaactccggtgac
gagccaagcgtagtagtcgacaaggtcaagcagggttcgggtaactacggttacaacgct
gctaccggcgaatacggcgacatgatcgaaatgggtatcctggacccggccaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccaccgaagccatg
atcgctgagatcaaggaagacggtccagctggcggcggcatgccagacatgggcggtatg
ggcggcatgggcggcatgatgtaa
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