Pseudomonas frederiksbergensis: PFAS1_05925
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Entry
PFAS1_05925 CDS
T04786
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_05925
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PFAS1_05925
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_41
Rrf2
DIP2311-like_C
HTH_11
MksE
FmdA_AmdA
Motif
Other DBs
NCBI-ProteinID:
APV38899
LinkDB
All DBs
Position
1233945..1234649
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AA seq
234 aa
AA seq
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MSKYNQIYSDLLASITTERLERGARLPSETELMDSYQASRGTVRKAIEQLQERGFAQKVH
GKGTFVLSTNPIEFQLGGIVSFQETYPRLGNDVSTEVVEFTQIPLEGPLIEHIKAEAGSL
ITRIKRVRRIDGKRVILDINHFVSDVIPGLSRDIAEHSIYAFIEQTLQLQIAYAQRTIEA
VPRSKDDQQHLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDIARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacaaccagatctacagcgatctgcttgccagcatcacgaccgaacgtctg
gaacgcggcgcccggttgccttccgaaaccgaactgatggacagctatcaggccagtcgc
ggcaccgtgcgcaaggccatcgagcaattgcaggaacgcggtttcgcgcagaaggttcac
ggcaaaggcacgttcgtgctgtcgactaacccgatcgaattccagctcggcgggatcgtc
agctttcaggaaacgtatccacgcctgggtaacgacgtcagcaccgaggtggtcgagttc
actcaaatccccctcgaaggtccattgatcgaacacatcaaggctgaagccggcagcctg
atcacgcggatcaaacgggtgcggcggatcgacggcaaacgcgtgattttggacatcaac
catttcgtcagcgacgtgatccccggcctgtcccgggacattgccgagcactcgatctac
gccttcatcgagcagaccctgcaactgcaaatcgcctacgcccagcgcaccatcgaagcg
gtgccccggagcaaggacgaccagcaacacctggacctcgacggccagagccatgtgatc
gtggtcagcaaccagacgtttttgcaggatggtcggcagttcgaatacaccgagtcgcgg
catacgctggacaagttttacttttctgacattgcgcggcgctga
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