Pseudomonas frederiksbergensis: PFAS1_06005
Help
Entry
PFAS1_06005 CDS
T04786
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfk03009
]
PFAS1_06005
Ribosome biogenesis [BR:
pfk03009
]
Prokaryotic type
GTPases
PFAS1_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ABC_tran
Ras
DUF5906
AAA_24
NOG1
AAA_18
NTPase_1
SRPRB
cobW
SRP54
Nuc_deoxyri_tr2
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
APV38912
LinkDB
All DBs
Position
complement(1254695..1256164)
Genome browser
AA seq
489 aa
AA seq
DB search
MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANKV
DNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALSDFPKDDDELEEGEEEIVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN
DEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
AIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYASV
QNSFKSAVTRWPTNRLTTILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQIE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNSLTDRQVNKKRRMMSHHKK
ADKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccgaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgtgacgccatcgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggccaagtggcaagggcgttcctacattctggtcgacaccggcggtatc
tccggtgacgagcacggtatggacgaaaaaatggccgagcagtcgctgctggccattgaa
gaagcggatgtcgttctgttcctggtagatgccaaggccggtttcaccgccgccgaccag
atgatcgccgagcatttgcgcaaacgtaacaagcgttcttacgtggttgccaacaaggtc
gacaacatcgaccctgaaatggcccgcgccgaattcgccccgttgggcatgggccacgcg
atcccgatcgccggtgctcatggtcgtggcatcacccagatgctggaaatcgccctcagc
gacttcccgaaagacgatgatgaactggaagaaggcgaggaagagatcgttgccgaaggc
gaggaagccaagcgcattcctggcccaagcgaaaaagacgggatcaagatcgcgatcatc
ggccgtcctaacgtcggcaagtcgaccctggtcaaccgtatgctcggtgaagaccgggta
atcgtctatgacgagcccggcaccacgcgcgacagtatctacatcccgttcgagcgtaac
gacgagaagtacacgctgatcgacaccgccggcgtgcgcaagcgcggcaagattcacgaa
gaagttgaaaaattctccgtggtgaaaaccctgcaggcgatcaaagacgccaacgtggtg
atctttgtgatggacgcccgcgaaggcgtggtcgaccacgacctcaacttgctgggcttc
gccattgagtcgggtcgtgcgctggtgatcgcgatcaacaagtgggacggcatgaccccg
agcgagcgcgacttcgtgaaggtcgagctgcaacgccgactgttcttcgttgactacgct
gacattcacttcatctcggccttgcacggcacgggcgtgggcaatctctacgcctccgtg
cagaactcgttcaagtcggcggtcacccgctggccaaccaaccgcttgaccacgattctg
gaagatgctgtcggtgagcacgcgccgccgatggttaacaaccgtcggatcaagctgcgt
tatgcccacttgggtggtgccaacccgccgatcatcgtgattcacggtaaccagatcgag
aaggtgccgaagtcttacgtgcgctatctggaaaacacttatcgccgtgtcttgaagctg
gtcggtacgccgatccgcatcgagttcaagggcggggagaacccgtacgaaggcaacaag
aactcgctgaccgaccgccaggtcaacaagaagcgtcggatgatgtcgcaccacaagaaa
gccgacaagaagcgccgtgacaagcgctga
DBGET
integrated database retrieval system
