Pseudomonas frederiksbergensis: PFAS1_06020
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Entry
PFAS1_06020 CDS
T04786
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFAS1_06020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfk01007
]
PFAS1_06020
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_06020
Enzymes [BR:
pfk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
PFAS1_06020
Amino acid related enzymes [BR:
pfk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFAS1_06020
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFAS1_06020
Prokaryotic type
PFAS1_06020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
APV38915
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Position
complement(1258130..1259419)
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AA seq
429 aa
AA seq
DB search
MSKSLQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYKQIRMPIVEFTELFKRSIGEVT
DIVEKEMYTFDDRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQK
GRYRQFHQIGCEVFNLDGPDIDAELIVLTWRLWGELGIRDAVKLELNSLGTAESRGRYRE
ALVEFLSARLDMLDEDSQRRLKTNPLRVLDTKNADTQAVLADAPKMADYLDEESRVHFEG
LKARLDAAGIPYVINPKLVRGLDYYSKTVFEWVTDKLGAQGTVCAGGRYDGLVEQMGGKP
TPGVGFAMGIERLVLLLETLEQIPEEISRQVDVYLCAFGEAAELAGLALSERVRDQLPNL
RLQVNAGAGSFKSQFKKADKSGALYALILGDDEMAQQVVGFKPLRGQGEQQSIAWDALAA
HLATCVVQG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagtctctgcaagccatacgtggcatgaacgacatcctgcccgagcagactccc
ctgtggcgtcatttcgaaggcaccgtctcgcgtttgctggataactacggttacaagcag
atccgcatgccgatcgtcgagttcaccgagctgttcaagcgctccatcggtgaagtgacc
gacatcgtcgaaaaagagatgtacaccttcgacgaccgcaacggcgactccctgaccctg
cgccccgaaggcacagcggcctgcgtgcgtgcggtgctcgagcacggtatcaccggcggt
ggccaggtgcagaaactctggtacatcggcccgatgttccgccacgaacgtccgcagaaa
ggccgttatcgccagttccaccagatcggttgcgaagtcttcaacctcgacggtccggac
atcgacgccgagctgatcgtgctgacctggcgactgtggggcgagctgggcatccgtgat
gcggtcaagcttgaactcaacagcctcggcactgccgagtcccgtggtcgttatcgcgaa
gcgttggtcgagttcctttcggcccgtttggacatgctggacgaagacagccagcgccgt
ctgaaaaccaaccctttgcgggttctggataccaagaacgctgacactcaagccgtgttg
gccgacgcgccgaaaatggccgactacctcgacgaagaatcccgcgtgcacttcgagggc
ctcaaggctcgcctggacgccgccggcattccttacgtgatcaacccgaagctggttcgc
gggctggattactacagcaagaccgttttcgaatgggtcaccgacaaactgggcgcccag
ggcaccgtgtgtgccggtggtcgttacgacggtctggtggagcagatgggcggcaagccg
acccctggcgttggtttcgccatgggcatcgagcgcctggtgctgttgcttgaaaccctg
gagcagatcccggaagagatttcccgtcaggtcgacgtctacctctgcgccttcggtgaa
gccgccgagctggccggcctggccctgagtgaacgtgttcgtgatcaattgcccaacctg
cgcctgcaagtgaatgccggtgccggcagcttcaaaagccagttcaagaaagccgacaag
agtggtgcgttgtacgcgctgatcctcggtgacgacgaaatggcccagcaagtggtaggt
ttcaaacccctgcgtggccagggcgaacaacaaagcattgcctgggatgcgcttgcagca
cacctggccacctgcgtcgtgcagggttga
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