Pseudomonas frederiksbergensis: PFAS1_06165
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Entry
PFAS1_06165 CDS
T04786
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00630
Glyoxylate and dicarboxylate metabolism
pfk00680
Methane metabolism
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
pfk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PFAS1_06165
09102 Energy metabolism
00680 Methane metabolism
PFAS1_06165
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PFAS1_06165
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4_9
Fer4_6
Fer4_15
Fer4_2
Fer4_18
Fer4_16
Fer4_4
Fer4_NDSU1
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
APV38942
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All DBs
Position
1283535..1286417
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AA seq
960 aa
AA seq
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MITLFDPNTDIDLGTPARDSDVQVTLNIDGRSISVPEGTSVMRAAALLGTTIPKLCATDS
LEAFGSCRMCLVEIDGMRGYPASCTTPVTEGMTVHTQTPKLATLRRNVMELYISDHPLDC
LTCSANGNCELQTVAGQVGLREVRYGYEGENHLADVKDTSNPYFDYDPSKCIVCNRCVRA
CEETQGTFALTITGRGFESRVEAAGGENFLDSECVSCGACVQACPTATLMEKSVVELGQP
ERSVITTCAYCGVGCSFRAEMKGDQLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRIT
TPMIRKNITDPWQEVSWDEAVTYAASEFRRLQQKYGRDSIGGITSSRCTNEETYLVQKLV
RAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVILVMGANPSDAHPVF
ASQLKRRLREGARLIVIDPRRIDLVDSVHARAELHLALRPGTNVAMLNALAHVIVTEGLL
NQPFIDARCEGTDFAHWSEFVSRAENSPEVLGAICGVDPANIRAAARLYATGGNAAIYYG
LGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH
ISNEVVRAEFEQAWNVTLQPDPGLRIPNMFEAALSGSFKGLYCQGEDIAQSDPNTQHVTA
ALSAMECIVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMDPLGGKAD
WEGTVALANALGYPMNYAHPSEIMDEIASLTPTFTNVSYAELDRHGSLQWPCNAAAPDGT
PTMHIEEFVRGKGRFMLTGYVPTEEKVNNRYPLLLTTGRILSQYNVGAQTRRTENVAWHD
EDRLEIHPTDAESRGINEGDWVGIGSRAGQTVLRARVTERVAPGVVYTTFHFPESGANVI
TTDNSDWATNCPEYKVTAVEVSRVYHPSEWQKRYQEFSDNQHRLLDERRKARGTKAEVRR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgattactctcttcgacccaaacaccgatatcgacctgggcaccccggcccgcgacagc
gacgtgcaggtgaccctgaacatcgacggccgcagcatcagcgtgcccgaaggcacctcg
gtgatgcgcgccgctgcgctgctgggcaccaccattccgaaactgtgtgccaccgacagc
ctggaagccttcggctcctgccgcatgtgcctggtggagatcgacggcatgcgcggctac
cccgcgtcctgcaccacgccggtcaccgaaggcatgaccgtgcacacgcagacgccgaaa
ctcgccacgctgcgccgcaacgtcatggagctgtacatctccgatcacccgctggattgc
ctgacctgctcggccaacggcaactgcgagctgcaaaccgtcgctggccaagttggtctg
cgggaagtgcgttacggctatgaaggcgagaaccatctcgccgacgtgaaggacacctcc
aacccgtatttcgattacgacccgagcaaatgcatcgtctgcaaccgctgcgtgcgcgcc
tgcgaagaaacccagggcacctttgccctgaccatcaccgggcgcggttttgaatcccgc
gttgaggccgccggtggcgagaacttcctcgactcggaatgcgtgtcctgcggcgcttgt
gtgcaagcctgcccgaccgcgaccctgatggaaaaaagcgtggtcgaactgggccagccc
gaacgcagcgtgatcaccacctgtgcctattgcggcgtgggttgctcgttccgcgccgag
atgaaaggcgaccagttggtgcgcatggttccggacaagaatggccaggccaaccacggc
cactcctgcgtcaaagggcgctttgcctggggctacgccacccacccggatcgcatcacc
acaccgatgatccgcaaaaacatcaccgacccttggcaggaagtcagctgggatgaagcg
gtgacctacgccgccagcgaattccgtcggttgcagcagaaatacggccgcgactcgatt
ggtggcatcacctccagccgttgcaccaacgaagaaacctacctggtgcaaaaactggtg
cgcgccgcgttcggcaacaacaacgtcgacacctgtgcgcgggtctgccactcgccgacc
ggctatggcctgaaacaaacccttggcgagtccgccggcacccagagtttcgattcggtg
atgcaggccgacgtgatcctggtgatgggcgccaaccccagcgacgcccacccggtgttc
gcttcccaactcaaacgccgcttgcgtgaaggcgcgcggctgatcgtcatcgacccacgc
cgcattgatctggtggactcggtgcatgctcgcgccgaattgcacctggccctgcgcccg
ggcaccaacgtcgccatgctcaatgccctggcccacgtcatcgtcaccgaaggtctgctc
aatcagcccttcatcgacgcccgttgcgaaggcacggatttcgcccactggagcgagttc
gtcagccgcgcggaaaactcgccggaagtcctcggcgccatctgcggcgtagaccctgcc
aacatccgcgccgccgctcgcctgtatgccactggcggcaacgcggcgatctattacggc
ctgggcgtcaccgagcacagccagggcagcaccgccgtcatgggcatcgccaacctggcc
atggccaccggcaacattggccgcgaaggcgtgggcgtgaacccgctgcgtgggcagaac
aacgttcagggctcctgcgacatgggctccttcccccacgaactgcccggctaccgccac
atctccaacgaggtcgttcgcgcagaattcgaacaggcctggaacgtcaccctgcaaccc
gacccgggcctgcgcattcccaacatgttcgaggcagcgttgagcggcagcttcaagggc
ttgtattgccaaggtgaagacatcgcccagagcgacccgaatacccaacacgtcaccgca
gccctgtccgccatggaatgcatcgtggtgcaggacattttcctcaacgaaaccgccaag
ttcgcccacgtgttcctgccgggcagttcgtttctggaaaaagacggcaccttcaccaac
gccgaacgacgcatctcccgggtgcgcaaggtcatggaccctctgggcggcaaggccgac
tgggaaggcaccgtggccctggccaacgccctgggctacccgatgaactacgcgcatcca
tcagaaatcatggatgaaatcgccagcctgacgccgacctttaccaacgtcagctacgcc
gaactggatcgccacggcagcctgcaatggccgtgcaacgccgcggcaccggacggcacg
ccgaccatgcacatcgaggagttcgtgcgcggcaaggggcgcttcatgctcaccggctac
gtgcccaccgaggagaaggtcaacaatcgctatccgctgctgctgaccaccgggcgcatc
ctcagccagtacaacgtcggcgctcagacccggcgtaccgagaacgttgcctggcacgac
gaagaccgtctggaaatccacccgaccgacgccgagagtcgtggcatcaacgaaggtgac
tgggtcggcatcggcagccgcgccggccagaccgtactgcgtgcgcgggtcaccgaacgg
gtcgccccgggcgtggtgtacaccacgttccacttccctgaatcgggggccaacgtgatc
accaccgacaactccgactgggccaccaactgtccggagtacaaggtcacggccgtggaa
gtcagccgcgtctatcacccgtccgagtggcaaaaacgctatcaggagttcagtgacaac
caacaccgcctgctcgacgaacgccgtaaggcgcgtggcactaaagccgaggtacgccga
tga
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