Pseudomonas frederiksbergensis: PFAS1_06460
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Entry
PFAS1_06460 CDS
T04786
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_06460
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_06460
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Comm
Motif
Other DBs
NCBI-ProteinID:
APV38999
LinkDB
All DBs
Position
complement(1347722..1350151)
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AA seq
809 aa
AA seq
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MKSRAKSGSVKQWLGTCALSFSALALLPLSVAVAAEAGSTRQSAPFSFAMAAKPLPQALS
DFSRITGISVVYTDEAPYGINAPALSGQMSTEQAMQRLLSGSGFTFRRTDGHTLALEPLP
TDGALNLGATTITSVADQSMSYQPPPTSSVMRSSALLQEIPQTVNVVPAQVIRDQAPRNL
DDALANVSGITQGNTLASTQDSVMTRGFGDNRNGSIMRDGMPIVQGRGMNATVDRVEVLK
GPASLLYGIQDPGGVVNMVSKKPELEQYNALTLRGSTYGDGKNGSGGGLDSTGALGDSGL
AYRMVLDHEDEDYWRNFGTHRETLVAPSLAWFAESTKLLFAYEHREFLTPFDRGTIIDPR
DNHPLDISRERRLDEPFNNMEGRSDLYHFEADHELNDNWKAHFGYSWNRETYDASQVRIT
AIDTKKGTLTRSMDGTQNAISTDRFTTASLEGNVQLAGMKHDLVFGVDDEYRKIYREDLI
RQKSLSTFSYLNPVYGREVAGTTVSPADSAQTDKLRSDSVFLQDSIHLTDQWIFVAGARF
QEYDQYAGKGVPFKANTDSNGQKWVPRAGLVYRYTDELSFYGSYTESFKPNSTIAPLSGS
STVLDGSVAPEEAKSWEIGAKLDMPGRVTGNVALFDIKKRNVLVANSEGPVTIYSAAGEV
RSRGLEVDLSGQLSDRWSMIGSYAYTDAEVTEDPIYKGKKLQNVAKNSGSLSAVYDFGTI
VGGDQLRVGAGARYVGERAGNAVNDFDLPSYTVADAFATYDTKVEGQKVKFQLNVKNLFD
RTYYTSAASRFFVSMGDSRQISLSSTLEF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccagggcaaaatcgggttcggtcaaacaatggttgggtacgtgtgccttgagc
ttttcggcgttggcgttgctgccgttgagtgtggcggtggcggctgaggccggcagtacc
cgacagagtgcgccgttcagctttgcaatggctgccaaaccgttgccccaggccttgagc
gacttcagccggatcaccggcatcagcgtggtctacaccgatgaggcgccgtacggcatc
aacgctccagcgctcagcgggcagatgagtaccgagcaggcgatgcagcgattgctcagt
ggttcggggttcaccttccgtcgcaccgacggccacaccttggcgctggagccgttgccc
accgatggcgccttgaacctgggagcgaccaccatcacctcagtggccgatcagtccatg
agctatcagccgccgcccaccagttcggtgatgcgctcctcggccttgctccaggaaatc
ccccagaccgtcaacgtggttccggcgcaggtcattcgcgatcaggcgccgcgcaatctg
gatgacgcgctggccaacgtcagcggcattactcaaggcaacacgctggcgagcactcag
gactcggtgatgactcgtggcttcggcgacaaccgcaacggctcgatcatgcgcgacggc
atgccgatcgtgcagggccgtggcatgaatgcgaccgtggaccgggtcgaagtgctgaag
ggcccggcctcgcttctttacggcatccaggacccgggcggcgtggtcaacatggtcagc
aaaaagcccgaacttgagcagtacaacgcgttgaccctgcgtggctcgacctatggcgac
ggcaaaaacggcagcggtggcggcctcgacagcaccggcgcgttgggtgattccgggctg
gcctatcgcatggtcctggaccacgaagacgaagattactggcgcaatttcggcactcac
cgcgagacattggtcgcaccgtcactggcctggttcgccgaaagcaccaaactgctgttc
gcctacgaacaccgcgagttcctgaccccgttcgaccgcggcacgatcatcgacccgcgt
gacaaccatccgctggacatctcccgcgaacgtcgtctcgacgagcccttcaacaacatg
gaaggccgctcggacctctatcacttcgaggccgatcacgagctcaacgacaactggaaa
gcccacttcggctacagctggaaccgcgaaacctacgacgccagccaggtgcgcatcact
gccatcgacaccaagaaaggcaccctgactcgcagcatggacggcactcagaacgcgatc
agcaccgaccgcttcaccaccgccagcctggaaggcaatgtccagctcgcggggatgaaa
catgacctggtgttcggcgtcgatgatgaatatcgcaagatctaccgcgaagacctgatc
cgtcagaaaagcctgagcaccttcagttacctcaacccggtttacggccgcgaagtcgcc
ggcaccacggtcagcccggccgacagcgcgcagaccgacaaactgcgcagcgattcggtg
tttttgcaggactcgattcacctgaccgatcaatggattttcgtcgctggcgcgcgcttc
caggaatacgaccagtacgctggcaaaggcgtaccgttcaaggctaacaccgacagcaac
ggccagaaatgggtgcctcgcgccggcctggtgtatcgctacaccgatgaactgtcgttc
tatggcagctacaccgagtcgttcaaacccaactcgaccattgcgccgttgagcggcagc
agcaccgtgttggacggcagcgtcgcgccggaagaagccaagtcctgggaaattggcgcc
aagctcgacatgccgggccgcgtcaccggtaacgtcgcgctgttcgacatcaagaaacgc
aacgtgctggtggctaattccgaaggcccggtgacgatctacagcgccgccggtgaagtg
cgttcacgtggtctggaagtggacttgagcggtcagttgagtgatcgctggagcatgatc
ggcagctatgcctacaccgatgccgaagtcacggaagacccgatctacaaaggcaaaaag
ctgcaaaacgtagcgaagaatagtggttcgctgtcagcggtttatgactttggcactatc
gtcggtggcgatcagctgcgggtcggtgcgggggcgcggtatgtcggtgagcgagcgggt
aacgcggtgaacgattttgatctgccgagttacaccgtggccgatgcgttcgcaacctac
gacaccaaagtcgaggggcagaaggtcaagttccagctcaacgtgaagaacctgtttgac
cgcacctactacacctcggcggcgagccggttctttgtgtcgatgggggattcgcggcag
atctccttgtcgagcacgttggagttctga
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