Pseudomonas frederiksbergensis: PFAS1_06500
Help
Entry
PFAS1_06500 CDS
T04786
Name
(GenBank) L-serine ammonia-lyase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00260
Glycine, serine and threonine metabolism
pfk00270
Cysteine and methionine metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01200
Carbon metabolism
pfk01230
Biosynthesis of amino acids
Module
pfk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFAS1_06500
00270 Cysteine and methionine metabolism
PFAS1_06500
Enzymes [BR:
pfk01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
PFAS1_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
Motif
Other DBs
NCBI-ProteinID:
APV39006
LinkDB
All DBs
Position
1356040..1357416
Genome browser
AA seq
458 aa
AA seq
DB search
MAISVFDLFKVGIGPSSSHTVGPMRAAATFVQALIDQQLLADVRRVEIRLYGSLSATGVG
HATDRACVMGLMGEWPDSIDPTSIDSRIQTLRETGELSLAGKTTIAFNWQSDLLLLDESL
PYHPNAMSLTAFGETGELSEQTYYSIGGGFIIEAAEAESGIAPASDVVLPYDFSSAAELL
KLCNQHGLRVSELMMANELAWRSEAEIRQGLLHIWSVMRECVEQGLRHEGILPGGLNVPR
RAAKLHRSLLEIGKPNVITSTLSAMEWVNLFALAVNEENAAGGRMVTAPTNGAAGIIPAV
LHYYMKFNPDASDDDVVAFFLGAAAVGILCKKNASISGAEVGCQGEVGSACAMAAAGLAD
ILGATPEQLENAAEIGLEHNLGLTCDPVGGLVQVPCIERNAIAAVKAINATQMALRGDGK
HFISLDRVIRTMRDTGADMHDKYKETSRGGLAVSWVEC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagtgttttcgatcttttcaaagtcggcatcggtccgtccagttcccacacc
gtcggcccgatgcgcgccgccgcgaccttcgtccaagccctgattgaccaacaattgctg
gccgacgtacgacgcgtagaaatccgactgtatggctcgctgtcggcgaccggcgtcggt
cacgccaccgaccgcgcctgcgtcatgggcctgatgggcgagtggccggacagcatcgat
ccaacgtcgatcgacagtcgaatccagaccctgcgtgaaaccggtgaactgtccctggca
ggcaaaaccaccatcgccttcaactggcagagcgatcttctgctgctggacgagagcttg
ccctaccaccccaatgcgatgtccctgacagcctttggcgaaaccggtgagctatcggag
caaacgtactactcgatcggtggcggtttcatcatcgaagcggccgaagccgagtccggg
attgcgccagccagcgatgtggtgctgccgtacgatttttccagcgccgccgaactactc
aagctctgcaaccagcacggtctgcgcgtttccgagttgatgatggccaatgaactggcc
tggcgcagcgaagcggaaatccgtcagggcctgttgcacatttggtcggtgatgcgcgaa
tgcgtcgagcaagggctgcgccacgaaggcatcctgcccggcggtctgaatgttccccgt
cgcgcggcgaaattgcaccgcagcctgttggaaatcggcaagccgaatgtcatcacctcc
acgctatcggccatggagtgggtgaacctgtttgccctcgccgtgaacgaagaaaacgca
gcgggcgggcgcatggtcacggcgccgaccaacggcgcggcggggatcattccagcggtg
ctgcactactacatgaaattcaacccggacgcgtcggacgatgacgtggtggcgttcttt
ttgggcgctgcggccgtaggaattctctgcaagaaaaacgcctctatctccggtgccgaa
gtcggctgccagggcgaagtcggctcggcctgcgccatggccgccgccggtctggccgac
atactcggcgccacgcccgagcaactggaaaacgccgccgaaatcggcctggaacacaac
ctcggcctgacctgcgacccggtcggcggcctggtgcaagtgccgtgcatcgagcgcaat
gcgattgctgccgtgaaggcgatcaacgctacgcaaatggccctgcgcggcgacggcaaa
cacttcatttccctggaccgggtgatccgcaccatgcgcgataccggcgccgacatgcat
gacaaatacaaagagacttcacggggcggcctggctgtcagctgggtggagtgctga
DBGET
integrated database retrieval system