Pseudomonas frederiksbergensis: PFAS1_06895
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Entry
PFAS1_06895 CDS
T04786
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfk03019
]
PFAS1_06895
Messenger RNA biogenesis [BR:
pfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PFAS1_06895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
SKI
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APV39083
LinkDB
All DBs
Position
1430570..1431427
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AA seq
285 aa
AA seq
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MRLIIVSGRSGSGKSTALDVLEDNGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLEEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLSNSNRSLAEA
INDETALLGPIADLADLKVNTTNLNLYQLRDTIKLRLLNQPESGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDQSGLDQPVADYLAAQPDVEEMFQDISTYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQALQKSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgatcatcgtcagtggccgttccggctcaggtaaaagtaccgcactcgatgtt
ctcgaggacaacggcttctactgcatcgacaacctgcccgccggcctgctgccggaactg
gccgaacgtgcgctgatccatactgagctggcgcaaccgctggtggccgtatcgatcgat
gcgcgcaacttgccgagtcacttgtcgcgttttcccgaactgctggaagaagtgcgcagc
cggcatatccagtgtgatgtgctttatctggacgccgacgaagaaaccttgctcaagcgt
ttctcggaaacccgccgtcgtcacccgctgagcaactccaatcgttcgctggccgaggcc
atcaacgatgagaccgccctgctcgggccgattgccgatctcgccgatctcaaggtaaac
accaccaacctgaacctgtatcaactgcgagataccatcaagctgcgcctgttgaaccag
ccggaatccggtacggcgttcctggtggaatctttcggcttcaagcgtggaatgccggtg
gacgctgatctggtgttcgacgtgcgctgcctgccgaacccttactggaagccagagtta
cgcgatcaatcgggtctcgaccaaccggttgccgattacctggcggcacagccggacgtc
gaagagatgttccaggacatctccacctacttgttaaagtggctaccccgctttgccgcc
agcaaccgcgcttatgtcaccattgccattggctgcaccggcggccatcaccgctccgtc
tacctgaccgaacgtctgggccaggccctgcaaaaatccctgaagaacgtccaggttcgc
caccgcgacctcagctaa
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