Pseudomonas frederiksbergensis: PFAS1_07160
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Entry
PFAS1_07160 CDS
T04786
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00330
Arginine and proline metabolism
pfk00480
Glutathione metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PFAS1_07160
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PFAS1_07160
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PFAS1_07160
Enzymes [BR:
pfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PFAS1_07160
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF7230
Motif
Other DBs
NCBI-ProteinID:
APV39135
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Position
1491255..1492418
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AA seq
387 aa
AA seq
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MSINVEDYFARDTFNKMKAFADKQETPFVVIDTAMISQAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLKEKGSNFDIASIYELDKVMNQGVGPDRISYGNTIKKSKDIRYFYEKGVRLYA
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgtcgaagactatttcgcgcgcgataccttcaacaaaatgaaggctttt
gccgacaaacaagaaaccccgttcgtggtgatcgacaccgcgatgatcagccaggcctat
gacgacctgcgcgccggtttcgaattcgccaaggtctactacgcagtcaaggccaacccg
gccgttgaaatcatcgacctgctcaaagagaaaggctcgaacttcgacatcgcttcgatc
tacgagctcgacaaagtgatgaaccagggcgtcggcccggatcgcatcagctacggcaac
accatcaagaaatccaaagacatccgctacttctacgagaagggcgtgcgtctgtatgcc
accgactccgaagccgacctgcgcaacatcgccaaggctgcaccgggttcgaaagtctat
gtgcgcatcctcaccgaaggctcgaccaccgctgactggcctctgtcgcgcaaattcggc
tgccagaccgacatggccatggacctgctgatcctcgctcgcgacctgggcctggtgcct
tacggcatctcgttccacgtcggttcgcaacagcgcgacatcagcgtctgggacgccgcg
atcgccaaggtcaaagtgatcttcgagcgtttgaaagaagaagacggcatcgttctcaag
ctgatcaacatgggcggtggcttcccggccaactacatcacccgcaccaacagcctggaa
acctacgccgaagaaatcatccgtttcctcaaggaagacttcggtgacgacctgccggaa
atcatcctggagccgggccgttcgttgatcgccaacgccggtatcctggtcagcgaagtg
gtgctggtcgcgcgtaaatcccgtaccgcggtagagcgatgggtgtacacggatgtgggc
aaattctccggcctgatcgaaaccatggacgaagccatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaagtggtcatcgccggcccgacctgcgacagcgccgacatc
atgtacgagaactacaagtacggcttgccgctgaacctggcgatcggtgatcgtttgtac
tggttgtcgaccggcgcgtacaccaccagctacagcgccgttgagttcaatggcttcccg
ccgctgaagtcgttttacgtgtaa
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