Pseudomonas frederiksbergensis: PFAS1_07190
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Entry
PFAS1_07190 CDS
T04786
Name
(GenBank) ligand-gated channel protein
KO
K16090
catecholate siderophore receptor
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_07190
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_07190
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
APV39141
LinkDB
All DBs
Position
1497610..1499871
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AA seq
753 aa
AA seq
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MSRQQSQLPVSSPRLLASAIGVAITAGSAGHMAFAAEKTDEKAPGNVISLGATAINGEAQ
DETSYKTDTSANKKYTAPLRETPKTVTVIPQQVIRDTGATSLVDALRTTPGITFGAGEGG
NPAGDRPIIRGFNAESDVFIDGMRDPASQSREIFNVESIEVSKGPGSAFTGAGSTGGSLN
LVSKTAKLGNAYNGGFTWGSDQTKRTTLDLNQQMTDTSAFRLNLMKHEANVAGRDAVDVS
RWGVAPSFAFGLGTDTRLTVGYYHVETDDMPDYGLPLSLSPNRSKYNVDKPVHVDRDNFY
GLTGRDYRQTSNDSGTIEIEHDLNDNLTVSNSFRMSRSTLDYIVTNPDDSKGNAALGSVY
RGAKSRNSTSSGWINQTDLSAKFNTGAIEHSLVTGLEFSYQDTHNRPYILTSTASGTRCN
RALFNSGDCTSLQNPTPGDHWNGSITDSAAFTDTDTKTAAAYVFDTLKFNEQWSLNLGLR
YDNYQVKSSGHANASSTVPANDFSRENTSDLVNYQIGVVYNPLPNGSIYAAYSTSSNPSG
ETSGNGGLELAANNSDLDPEKNRNYEIGTKWDFFGDDLSLTAALFRTEKTNARMNDPDGA
TTQVLDGEQRVNGVELSYSGKLTRNWRVFGGYTYMESEVVKTTLAADEGNHMPSTPRNNF
TFWSTYDLVPDKLTVGAGATFVDSQFGNIANSVEIPSYWRYDAMASYALTKNVDLQLNVQ
NLTDERYFDQILQTHYAHVAAGRTALLSANFHF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgccaacaatcacaattaccggtcagttcaccgcgtttgctcgcgtctgcaatt
ggcgtggcgatcactgccggctctgcgggccatatggctttcgcggctgaaaagactgac
gaaaaagcaccgggcaacgtgatttccctgggcgctaccgctatcaacggtgaagcccag
gacgagacctcctacaagaccgatacctcggccaacaagaaatacaccgcgccgctgcgt
gaaacgccgaaaaccgtcaccgtgattccgcaacaagtgattcgcgacacgggcgccacc
agtttggtcgatgcgctgcgtaccacaccgggtatcaccttcggtgccggtgaaggcggc
aacccggccggcgatcgcccgatcattcgcggcttcaacgcagaaagcgatgtgttcatc
gacggcatgcgcgacccggcctcccagagccgtgagatcttcaacgtagaatcgatcgaa
gtcagcaagggcccgggatcagccttcaccggcgccggttccaccggtggcagcctgaac
ctggtgagcaagaccgccaaactcggtaatgcctacaacggcggcttcacctggggctcg
gaccagaccaagcgcaccaccctcgacctgaaccagcagatgaccgacacctcggccttt
cgtctgaacctgatgaaacacgaagccaacgtcgccggccgtgatgccgtggacgtcagc
cgttggggcgtagcaccgtccttcgcgttcggcctggggaccgacacccgcctgaccgtc
ggttactaccacgtcgaaaccgacgacatgcccgactacggcctgccgttgtccttgagc
cccaaccgcagcaagtacaacgtcgataaacctgtgcatgtcgatcgtgacaacttctac
ggcctcaccggtcgcgactatcgccagaccagcaatgatagcggcaccatcgagatcgaa
cacgatctgaacgataacctgaccgtgtcgaacagcttccgcatgtcccgttccacgctc
gattacatcgtcaccaacccggacgacagcaagggcaacgcggcactcggcagcgtgtat
cgcggcgcgaaaagtcgtaactcgacgtccagcggctggatcaaccagaccgacctgagt
gcaaaattcaacaccggcgccatcgagcacagtctggtgaccggccttgagttttcctat
caggacacccacaaccgcccgtacatcctgacctcgaccgccagcggcacccgctgcaac
cgtgccctgttcaactccggcgactgcaccagcctgcagaacccgacgccaggggatcac
tggaacggctcgatcaccgacagcgccgcgttcaccgacaccgacaccaaaaccgctgcg
gcctacgtgttcgacacgctgaagttcaacgaacaatggtccctgaacctgggcctgcgt
tacgacaactatcaggtcaaatccagcggccacgccaacgccagcagcaccgtgccagcg
aacgatttctcccgtgaaaacaccagcgacctggtcaactaccagatcggcgtggtctac
aacccgttgcctaacggcagcatctacgcggcctactccacctccagcaacccgtccggt
gaaaccagcggcaacgggggcctggaactggcggcgaacaacagtgatctggacccggaa
aagaaccgcaactacgagatcggtaccaagtgggacttctttggtgacgacctgtcgctg
accgccgcactgttccgcaccgagaaaaccaatgcgcggatgaacgatccggatggcgcc
accacgcaagtgctggacggcgagcagcgggtaaatggcgtggagctgagctacagcggc
aaactgacccgtaactggagagtcttcggcggctacacctacatggaaagcgaagtggtc
aaaaccaccctcgctgccgatgaaggcaaccacatgccaagcactccacggaacaacttc
acgttctggtcgacctatgacctggtgccggacaagttgaccgtcggcgccggtgccacg
ttcgtcgactcgcagttcggcaacatcgccaactcggtggagatcccgtcctactggcgc
tacgacgcaatggccagctatgcgctgaccaagaacgtcgacctgcaactcaacgtgcag
aacctgaccgacgagcgttacttcgaccagatactgcagacccactacgcccacgtggcg
gcgggtcgcactgccctgctgagcgccaacttccacttctga
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