Pseudomonas frederiksbergensis: PFAS1_07285
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Entry
PFAS1_07285 CDS
T04786
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_07285
Enzymes [BR:
pfk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PFAS1_07285
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFAS1_07285
Prokaryotic type
PFAS1_07285
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
APV39158
UniProt:
A0A1P8ESG4
LinkDB
All DBs
Position
complement(1524664..1525581)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLLERPVTVGRADVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTITRLELLAFEGDTARLAVDCTKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSSFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagcct
ttggggttcacctccaatgcggcgttgcagaaggttcgctggctgctgaacgccgagaag
gccgggcacaccggcagtctcgacccgctggccaccggcgtgttgccgttgtgcttcggt
gaggccaccaagttttcgcaatacctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggccgatgccgaaggtgaagttttgctggagcgcccg
gtgaccgttggtcgcgccgatgtcgaagcggtactgccgaaatttcgtgggcaaatcagc
cagataccgcccatgtactcggcgctcaagcgtgatggccagccgttgtacaagctggcc
cgggcaggtgaagtagtggagcgcgaaccgcgttctgttactattacgcgcttggaatta
ctggcctttgaaggtgatactgcgcggcttgcggtggattgcaccaaaggtacctatatc
cgcaccctggtggaggatatcggtgagcaactcggttgtggcgcatacgttgctgaactg
cgacgtacccaggccgggcctttcacgctggcgcagacagtcaccctggaagagttggaa
gcggtacatgccgaaggcggcaacgaagcggtcgatcgctttttgatgccctcggacagc
ggcctgctggattggccactgttgcagttctcggagcacagctcgttctactggcttaac
ggccaaccggtacgagccccggatgcaccgaagttcggcatggtgcgggtacaggatcac
aatggccgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccacgtcga
ctgattcggtcagaatga
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