Pseudomonas frederiksbergensis: PFAS1_07640
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Entry
PFAS1_07640 CDS
T04786
Name
(GenBank) diguanylate cyclase
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFAS1_07640
Enzymes [BR:
pfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PFAS1_07640
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
Motif
Other DBs
NCBI-ProteinID:
APV39222
LinkDB
All DBs
Position
complement(1605219..1606487)
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AA seq
422 aa
AA seq
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MSLFKPGIRPTLRSVIGRGHLIVALVAVAMASISLTLLGVLALRVYADHNLHLIARSINY
TVEAAVVFNDKSAASEALALIASTEEVADAQVLDEQGTLLARWERPETGFFSDLEMQIAK
AFLEKPISMPIVHQGQAIGSIQLTGHGGSLLRFLLSGLVGIVLCTAVSAWVALYLARRQL
RAITGPLRSLAFVAHAARSERAFDQRVPAAAIAELDNLGNDFNALLDELESWQTHLRSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRNANKLNEQVAVLFLDSDRFKEINDGFGHAA
GDAVLVAVANRVRAQLREEDLVARLGGDEFAVLLTPLHRIEDAEWIADKIIASMEVPIPL
PGDTQVLTSLSIGIAVYPDHGTTPGALLNAADAAMYQAKRLSRGAQHTAGSEHSVADVQT
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagtctattcaaaccgggtatccgcccaaccttgcgctcggtcatcgggcgcggacat
ttgatcgtcgcactcgtggccgtggccatggccagcatctcgctgacgttgctcggcgta
ctggccttgcgggtctatgccgaccacaacttgcacctgattgcgcgctcgatcaattac
accgtggaagcggcggtggtgttcaacgacaagtctgccgctagcgaagcgctggcattg
attgcgtccaccgaagaagtggccgatgcccaagtgctggacgagcaaggcacgttgctg
gctcgctgggagcggccggaaacggggtttttctcggatctcgaaatgcagattgccaag
gcctttctggaaaaaccgatcagcatgccaatcgtccatcaaggtcaggcaattggcagc
atccagctcaccggtcacgggggcagcctgttgcggtttctgctcagcggtctggtcggc
atcgttttgtgtaccgccgtcagtgcctgggtggcgctctatctggcgcgccgacaactt
cgcgcaatcacggggccattgcgcagcctggcgttcgtggctcacgccgcccgcagcgag
cgagccttcgatcagcgtgtacccgccgccgccatcgccgaactcgacaacctgggcaat
gacttcaatgccttgctcgatgaactcgaatcctggcagacccacctgcgaagcgaaaac
gaaaccctggcccaccaggccagccatgacagcctcaccgggttaccgaatcgggcgttt
ttcgaagggcggctgattcgagcactgcgtaacgccaacaagctcaacgagcaagtggcg
gtgctgtttctcgacagtgatcggttcaaggagatcaatgatggcttcggtcatgccgct
ggcgacgcggtgttggtggccgtggccaatcgggttcgagcgcaactgcgtgaagaggat
ctggtggcacgcttgggcggtgacgaatttgccgtcctgctgacgccgctgcacaggatc
gaggacgccgaatggattgccgacaaaatcatcgccagcatggaagtaccgatcccgttg
ccgggcgatacccaggtgttgacttcactcagcatcggcatcgccgtgtaccccgaccat
gggaccacacccggtgctttgcttaacgccgccgacgcggccatgtaccaagccaagcgc
ctttcccgaggcgcacagcacacggcagggtcggagcactctgtcgccgatgttcaaacc
aggagctaa
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