KEGG   Pseudomonas frederiksbergensis: PFAS1_07965
Entry
PFAS1_07965       CDS       T04786                                 
Name
(GenBank) type VI secretion protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PFAS1_07965
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfk02044]
    PFAS1_07965
Secretion system [BR:pfk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PFAS1_07965
SSDB
Motif
Pfam: Phage_GPD DUF6484 Phage_base_V
Other DBs
NCBI-ProteinID: APV39279
LinkDB
Position
complement(1680079..1681407)
AA seq 442 aa
MFDPVNEPSFRLDVEGLPDPFEVLAFTGREAISEPFVFDVDLLIDDPTLDLASLLYRPAF
LHVGPAGNGFHGQLHELVQCDHDLVVRLCRVRLGPKLACLSLRFSQRIFSARSVPQILSQ
VLKEHGIVGKSRRFELSGDYPAREFCTQYRESDLQFIQRLCVQERLHYHFEHDARGHCVV
FGDGQGHFRFSESAVFRVESEQSAVRQFKLLGRAGQPAAPIAEGRTDLAALRSGQLMPLS
GHPIADCNHLWLLTRVEHQGSQDLTQSYSNQIHAIHWQVPFVAPHCAVKPRMHSLQRAWV
VNIDESCPDPSRPVAVQFDWLYQGEGAVPSHSWLPVAAELGDAAVEQLNEGAEVVVSFIE
GDPDQPLITGVLHVPSSVDDVDNDDPLHTSEVEEIGGLLALLQSSEPLMLLCLLPGGGSF
NHCTQVLCTCRAAKRFGQSGAA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgttcgatccagtcaacgagccgtcatttcgtctggatgtagagggtctgcccgacccc
tttgaggtcttggcctttaccggtagagaagccatcagcgagccttttgtgttcgacgtg
gatctgctgatcgatgaccccacactcgaccttgcaagcctgctgtaccgtccggccttt
ttgcatgtcgggccagcgggaaatggcttccacggacaattgcatgaactcgtccagtgt
gaccatgacctggttgtcaggctctgtcgcgtgcgtctggggccgaagctggcatgcctt
tccctgcgcttcagtcagcgaattttcagcgcgcgctcggtgccgcaaatcctcagtcag
gtgctcaaggagcacggtatcgtcggcaagagtcggcgctttgagctgagtggcgattac
ccggcccgtgaattctgtacgcagtaccgggaatcagacctgcaatttatccagcgtttg
tgtgtccaggaacggcttcactaccatttcgaacacgacgcgcgcgggcattgcgtggtt
ttcggtgatggtcaggggcactttcgtttcagcgagagcgcggtcttccgggtcgagagc
gaacaatcggccgtgcggcagttcaagcttctggggcgcgctgggcagccagccgcgccg
attgccgaaggtcgaacggacctggcggcgctgcgcagcggtcagttgatgccgctgtcc
ggtcatccgatagccgactgcaaccatctctggctgctgacccgggtggagcatcagggc
agccaggatttaacgcagtcctacagcaaccagatccatgcgatccactggcaggtgcct
tttgtcgcgcctcattgcgcagtgaaacccaggatgcacagcctgcaacgggcctgggtg
gtcaacatcgatgagtcatgccccgatccgtccagaccggttgccgtgcaatttgactgg
ctttatcagggcgagggcgccgtgcccagccacagttggctgccggtggccgctgaactg
ggcgacgcggcggtcgagcagttgaatgagggtgcagaagtggttgtgagctttatcgag
ggggatccggatcagccgctgattaccggggttcttcacgttccttcgtccgttgacgac
gttgataacgacgacccgctgcacacatctgaggtcgaggaaatcgggggcttgctggcg
ctactgcaatcgagcgaaccattgatgttgctatgcctgctgcccggtggcggcagtttc
aaccattgcacgcaggtcctctgcacctgccgggccgcgaagcggtttggccagagcggt
gcggcatga

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