Pseudomonas frederiksbergensis: PFAS1_07970
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Entry
PFAS1_07970 CDS
T04786
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00330
Arginine and proline metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PFAS1_07970
Enzymes [BR:
pfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PFAS1_07970
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
APV39280
LinkDB
All DBs
Position
complement(1681641..1683554)
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AA seq
637 aa
AA seq
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MSVRRTRKDDGSQWTVADSRSVYGIRHWGAGYFAINDAGRVEVRPNGPTSSPIDLFEQVD
QLRKSGLSLPLLVRFPDILQDRVRQLTGAFDANIERLEYQSKYTALYPIKVNQQEAVIEN
IIATQDVSIGLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVI
EKESEVGLVIEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERF
RAAGLDQGIRLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDY
DGTHSRNASSINYDMDDYAGVVVGMLKEFCDAQNLPHPNIFSESGRSLTAHHAMLVVQVT
DVEKHNDDVPKIDNKEELPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVATQYADGKL
TLAEKALAEQCYFAVCRRLHNSLKARQRSHRQVLDELNDKLADKYICNFSVFQSLPDTWA
IGQVLPILPLHRLDEEPLRRAVLQDLTCDSDGKIKQYVDEQSIETSLPVHGLNEGEDYLL
GIFLVGAYQEILGDMHNLFGDTDSVNIYQNADGSVYHAGIETHDTIEDMLRYVHLSPEEL
MTHYRDKCASARITAAERTQFLDALRLGLTRSSYLSS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgacgcacacgcaaagacgatggcagccaatggacagttgcggacagccgc
agtgtttacgggattcgccattggggggccgggtacttcgcgatcaatgacgccggtcgc
gtcgaagttcgtccgaacggtccgaccagttcgcctatcgacctgttcgagcaagtcgac
cagctgcgtaaaagcggtttgtccttgccgttgctggtgcgtttccctgacattctgcaa
gaccgcgtgcgtcagttgaccggcgcgttcgacgcgaacatcgagcgtctggaataccag
agcaagtacaccgcgctgtacccgatcaaggttaaccagcaagaagcggtgatcgagaac
atcattgccacccaggacgtgtccattggtcttgaagccggctccaagcctgagctgctg
gccgtgctggccctggcgccgaagggcggcaccatcgtctgcaacggctataaggatcgc
gaattcattcgtctggcgctgatgggccagaagctcggccacaacgtgttcatcgtgatc
gagaaagaatccgaagtcggtctggtgatcgaagaagccgcctcgctcaaggtcaagcct
caggttggcctgcgcgtgcgtctgtcgtccctggcgtcgagcaagtgggctgacaccggt
ggcgaaaaatccaagttcggtctgtcggcggcgcaattgctgtcggtggtcgagcgtttc
cgcgctgctggcctggaccagggcattcgcctgttgcacttccacatgggctcgcagatc
gccaacctggcggactaccagcacggcttcaaggaagcgattcgttactacggcgaactg
cgcaacctcggcctgccggtggatcacatcgacgtcggtggcggtttgggcgtggactac
gacggtacgcactcgcgtaacgccagttcgatcaactacgacatggacgattacgccggt
gtcgtggtcgggatgctcaaggaattctgcgacgcgcagaacctgccgcacccgaacatc
ttctctgaaagcggccgttccctgaccgcacaccacgcgatgctggtggtgcaagtgacc
gacgtcgagaaacacaacgacgacgtgccgaaaatcgacaacaaggaagaactgccggaa
accgtgcaatggctggttgacctgctgggcccgaccgacatcgagatggtcaccgaaacc
tactggcgcgccactcactacatgagcgatgttgcgacccagtacgccgatggcaagttg
actctggccgagaaagccctggccgagcaatgctacttcgccgtgtgccgtcgcttgcac
aactcgttgaaggcgcgtcagcgttcgcaccgtcaggtgctcgacgaactcaacgacaag
ctggccgacaagtacatctgcaacttctcggtattccagagcctgccggacacctgggcc
atcggccaggtcctgccgatcctgccgctgcatcgtctcgacgaagaaccgctgcgccgt
gcggtgctgcaagacctgacctgcgactccgacggcaagatcaagcaatacgtcgacgag
cagagcatcgagaccagcttgccggtgcatggtttgaacgaaggtgaagactacctgctg
ggtattttcctggtcggcgcctaccaggaaattctcggcgacatgcacaacctgttcggt
gacaccgactcggtgaacatctatcagaacgctgacggcagcgtgtaccacgcgggtatc
gaaacccacgacactatcgaagacatgctgcgttacgtgcacttgtcgccggaagagttg
atgacccactatcgcgacaaatgcgccagcgcccgcatcaccgccgccgagcgtacccag
ttcctcgacgcattgcgtctggggctgacccgttcttcttacctgtcttcttga
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