Pseudomonas frederiksbergensis: PFAS1_08705
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Entry
PFAS1_08705 CDS
T04786
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00540
Lipopolysaccharide biosynthesis
pfk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PFAS1_08705
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pfk01005
]
PFAS1_08705
Enzymes [BR:
pfk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PFAS1_08705
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PFAS1_08705
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
PFAS1_08705
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
PFAS1_08705
Lipopolysaccharide biosynthesis proteins [BR:
pfk01005
]
Lipid A
PFAS1_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Epimerase_2
Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
APV39419
LinkDB
All DBs
Position
complement(1858863..1860143)
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AA seq
426 aa
AA seq
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MNRTLYTALFYLGLPLVAIRLWLRARKAPAYAKRIGERFSLGLPTMKTGGIWVHAVSVGE
SIAAAPMIRALLQRYPQLPITVTCMTPTGSERIHALFANEPRIQHCYLPYDLPCAAKRFL
DRVQPKLAVIMETELWPNHIHQCARRGIPVALANARLSERSAKGYGRFGKLTQPMLAEMS
LFAVQTEAEAQRFRDLGARPETVEVTGSIKFDLTIDPALLQRAAELRAQWQAQERAVWIA
ASTHEGEDEVVLAAHRQLLANHPDALLILVPRHPERFNTVFELCRQQGFATVRRSTGDPV
TAQTSVLVGDTMGELLFLYALADSAFVGGSLVPNGGHNLLEPAALAKPVLSGPHLFNFLE
IAAQLRSAGALQEVEDAEGLALAVQRLFELPSDAQRMAQAGLKVMRTNQGALQRLLDGLG
RLIDKS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaactctctacaccgcgctgttttacttggggctgccactggtagcgattcgg
ctgtggctgcgggcgcgtaaggcgccggcgtacgccaagcgcattggcgaacgtttctcc
ctcgggttaccgacgatgaaaacgggcggcatctgggtgcacgcggtgtcggtgggcgaa
agcattgccgcggcgccgatgattcgcgccttgctgcaacgttatccacagttgcccatt
accgtgacctgcatgaccccgaccggttcggagcgtatccacgcgctgttcgccaatgaa
ccgcgcatccagcactgctatttgccttatgacttgccttgcgcagcgaagcgattcctt
gatcgggtgcagccgaaactggcggtgatcatggaaaccgagctctggccgaaccatatc
catcagtgcgccaggcgcgggattcccgtggccctggccaatgcgcgactgtccgagcgt
tccgccaagggttatggccgcttcggcaaactgacccagccgatgctcgccgagatgagc
ctgttcgcggtgcagaccgaagccgaggcccagcgcttccgcgatttgggcgcgcgcccg
gaaaccgtcgaagtgaccggctcgatcaagttcgacctgaccatcgacccggcactgctt
cagcgtgccgccgagttgcgtgcgcaatggcaggcgcaggagcgcgcggtgtggattgcg
gccagtacgcacgaaggcgaagacgaagtggtgctggcggctcatcgtcagttgctggcc
aatcatcccgatgcattgttgattctggtgccgcgccatccagaacgtttcaacacggtg
ttcgagctatgtcggcaacagggtttcgccacggtgcgtcgctccactggcgacccggtc
accgcgcaaacgtcggtgctggtgggcgacaccatgggtgagttgctgtttctgtatgcc
ttggccgacagcgcttttgttggcggcagtctggtgccgaacggcgggcacaacctgctg
gagccggcggctctggccaaaccggtgttgagcgggccacacctgttcaatttcctcgaa
atcgccgcgcagttgcgcagtgccggggcgttgcaggaagtggaggatgccgaaggtctg
gcgctggcggtgcagcggctgttcgaattgccgagcgatgcgcaacggatggcgcaggcg
gggttgaaagtgatgcgcaccaatcagggcgcgttgcagcgattgctggatgggttgggg
cggttgatcgacaagtcctga
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