Pseudomonas frederiksbergensis: PFAS1_09670
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Entry
PFAS1_09670 CDS
T04786
Name
(GenBank) ATP-dependent endonuclease
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PFAS1_09670
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GFIT
Motif
Pfam:
AAA_15
DUF2813
AAA_21
OLD-like_TOPRIM
AAA_23
SMC_N
AAA_29
Vps36-NZF-N
DUF3027
WXG100
Motif
Other DBs
NCBI-ProteinID:
APV39602
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Position
2082474..2084303
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AA seq
609 aa
AA seq
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MEILVDVVRVAGFRGVKELEVNLSPVTVLIGMNNSGKTSVIKALQLSLGDYARLLTEEDF
HISKDQTRATEIKVDSRIVPIDATGARAKVFPAAWMEHFGDSIQSEADGSQFVALRSNSR
PNLIKGGFETNRFSLDKWPEYTDWQTASVKETRLGNKRFNLSLIPIDAQRDIHNELKDKY
SFVGKILSSVSYEKADIDSMEKVIALANNEAVSKSEELKNLKAHLESLSASFQGAGSAEI
TPFPKKIRDLSKHFSIQFGEDSSNSFSMEYHGMGTRSWASMLTVKSFLEMTANKHKEEEE
PFFPILAAEEPEAHLHPNAQKTLYHQLASSEGQVVVSTHSPYLAAMAEQSYIRYLRKRQD
DIFVGQLANGLDPEDKRRLQREVMHSRGEIIFSKALVLCEGETEEQALPLLFKKYFNFDP
FVLGVSFIGVGGSGKKYLPFLSFARDFSIPLFIFSDGEAEAVRGLTKVYSGVYGATDVTH
CDNITILDGTDFEGYLLSSGHRELVVSVITDLDGVDAVDRWIEKRNGTSSGRAKTNQPPC
KSCGQPIFIDIIRDYKKAGGEDIAICEILDSSKPRFAPAIAEKLCTLDPAHLPPKIIELF
ENIKKGAGL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcttagtggacgtcgttagggttgcgggcttcagaggtgtaaaagaactagag
gtaaatttatccccagttacagttttaatcgggatgaacaactctgggaagacttccgta
atcaaagcgcttcaactttctctcggagattatgcgcgacttctaacagaggaagatttc
catatatctaaagaccagacgcgagccacagaaataaaagtggactcccgaattgtgcca
atagatgccaccggagcgagagccaaagtctttccggccgcttggatggagcactttggc
gatagcattcagtcagaagctgatggtagtcaatttgtggcattacgctcaaatagccgc
ccaaacttgataaagggtggatttgaaaccaataggttttcactcgacaaatggccggaa
tatacagactggcaaactgcgtctgttaaagagactcgtctgggcaataaaagattcaac
ttgtcactaataccaattgatgcccagcgagacatacataacgagttaaaagacaaatat
tcatttgtaggaaaaatactttcgagtgtctcctatgaaaaagcagatattgattcaatg
gagaaagtcatagctcttgcaaataacgaagctgttagcaaaagtgaggagcttaaaaac
ctaaaggcacacttagaatcgcttagtgcgtcattccaaggagcaggaagcgccgaaatc
acaccattccccaaaaaaattcgcgatctatcgaaacacttttcgatccagttcggggaa
gactccagcaattcgttttctatggaatatcatggaatgggtactcgcagctgggcatca
atgttgaccgtaaaatcttttttggaaatgacggcaaacaaacacaaagaagaagaggag
ccatttttccctatcctggctgctgaagagccagaggcgcaccttcacccaaatgctcaa
aagacgctctatcaccaactggcaagttctgaaggccaagtcgttgttagtacacactca
ccctacctcgcggccatggctgaacagtcctatatccgctatctacgaaagcgccaagac
gacatttttgtaggacagttggctaatggattagatcccgaggataagagacgtctgcaa
agagaggtcatgcattcaaggggggaaataattttctccaaagctcttgttctatgtgaa
ggggaaacagaagaacaggcccttccgctcctatttaaaaaatattttaattttgatccg
tttgtcttaggtgtgagtttcataggtgttggcggatccggaaaaaaatatcttcctttt
ctcagtttcgcaagggatttctcaattccgctgtttatatttagtgacggtgaggctgaa
gccgtccgcggcctgactaaggtgtacagcggagtatatggtgcaaccgatgtgacacac
tgcgacaatataactatcctcgacggtactgacttcgaaggatatctactctcttccggc
catagggaattggtagtatcggtcattaccgatctggacggagttgatgcagttgatcgc
tggattgaaaaaagaaacgggacttcctccggacgcgccaagactaaccaacctccttgt
aaatcatgtggccagcccattttcattgatattattagagattataaaaaggcaggcggt
gaagatatcgcgatttgtgaaatactcgattcaagcaaaccacgctttgctccggcgata
gctgaaaaactctgcactttagaccccgctcacctgccgccaaaaatcatagagcttttt
gaaaatatcaaaaaaggggccggattgtaa
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