Pseudomonas frederiksbergensis: PFAS1_09745
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Entry
PFAS1_09745 CDS
T04786
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_09745
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_09745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APV39617
LinkDB
All DBs
Position
2099877..2101967
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AA seq
696 aa
AA seq
DB search
MPAPFRLTPVTLGLSAFLSAGFACAAPTVLPETSISAEAEADDPRVKETSTATRTATPVR
YVPQAIDSIKTANVVDYGTNDLGTALSGIPNVSSGADTRFDSLRIRGFDASNDFYLDGIR
DDSQYVRDLHNIERIEVLKGPAAVLYGRGSQGGIVNRVSKLPEFGRRSTLEAQGGSDDLR
SLYADLSTDPSENISLRLNMGNMDQNSFRDGVSGNRQLFAPSMSWQLTPDLNWLVQYEYS
RYNRTPDRGIPGVNGRPADVGRDTTYGSEHDFIDDKSQSLRSKLSYELSDNWQLRHTLGV
FKLNSDFDNTYLTGYTPATNKVTRQHWQQDLSTRNVYNNVELEGGFDTFGLEHRLLTGLE
IGSQRRDPTLYNAATGRGTQPVPALDLYNPDRNLRHTGRMQVSSSSHTEVESRAVYVQDQ
LRLNDQWQLLAGLRYDTFDIESTNKLRDISEDRDSHSTSPRVGLVWTPLQNHSFYASWSK
TFSPVGGGLIGITPGAAGNSNDLSPELTKQKEIGVKSDWLDDRLSTTLAIYELELYNRRT
SDPDNPTVTLMTGLQRSRGIELTGTGKIAGNWYVRGGVGVQDATVEKDNNGFEGKRISNV
AKHNGSLFLTWKPEMGWYAETGLTLVGQRYADNLNTTVLPGYGRWDALAGFRQKDWDLRA
ALNNISDKTYYSSATSAAQIQPGEPRSVVVTGTYSF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccccctttcgcctcacgcccgtcacccttgggctttctgcatttctctcggcc
ggttttgcctgcgccgcgcccactgtattacctgagacgtcgatcagcgccgaagccgaa
gccgatgacccgcgcgtgaaagaaaccagcaccgcgacccgcaccgccacgccggtgcgc
tacgttccacaagccatcgactcgattaaaaccgcgaacgtcgtggattacggcaccaac
gacctgggcaccgcgttgagcggcatccccaacgtcagcagcggcgccgacactcgcttc
gacagcctgcgcatccgcggtttcgacgccagcaacgacttctacctcgacggcatccgc
gacgacagccaatacgtgcgcgatttgcacaacatcgaacgcatcgaagtgctcaaaggc
ccggccgctgttttgtatggccgtggcagtcagggcgggatcgtcaatcgggtcagcaag
ctgcctgaattcgggcgccgctcgacccttgaggcccagggcggcagcgatgatttgcgc
agcctctacgccgacctcagcaccgacccgagcgagaacatcagcctgcgcctgaacatg
ggcaacatggatcaaaacagcttccgcgatggcgtgagcggcaatcgccaactgttcgct
ccgtcgatgagctggcaactgacgccggacctgaactggctggtgcagtacgaatacagc
cgctacaaccgtacgccggatcgcggcatccccggggtaaacggacgcccggcagacgta
ggacgggatacgacctacggcagcgagcacgatttcatcgacgacaagtcgcaatcgcta
cgctcgaagctgagttatgagctcagcgacaactggcaactgcgccacaccctgggcgtg
ttcaagctcaacagcgatttcgacaacacctacctgaccggttacaccccggcgaccaac
aaggtcacgcgccagcactggcaacaggacctgagcacccgcaacgtctacaacaacgtc
gagctggaaggcggtttcgacacgttcggcctcgagcatcgcttgctgaccggcctcgaa
atcggcagccagcggcgcgaccctacgctgtacaacgcggccaccgggcgcgggactcag
ccggtgccagcgctggacctgtacaaccccgaccgcaatttgcgccataccgggcggatg
caggtatccagcagctctcacaccgaagtcgaaagccgtgcggtgtacgtgcaggatcaa
ctgcgcctgaacgatcaatggcaactgctggcgggtttgcgttacgacactttcgatatc
gagtcgaccaacaagctgcgggatatttccgaagatcgcgacagccatagcaccagccca
cgtgtaggactggtgtggacgccgctgcagaatcattccttctacgcctcctggagcaag
acgttttccccggtcggcggtggtttgatcggtatcactccaggcgccgccggcaacagc
aacgacctgagccccgaactgaccaagcaaaaggaaatcggcgtgaagagcgactggctc
gatgatcgcctgagcaccacgttggcgatctacgaactggaactctacaaccgtcgtacc
agcgatcccgacaatccgaccgtcaccttgatgaccggcctgcaacgttcccgcgggatc
gagctgacgggcaccggcaagatcgccggcaactggtacgtgcgcggtggcgtgggtgtg
caggacgcgacggtcgaaaaggacaacaacggctttgaaggcaaacgcatcagcaacgtg
gccaagcataacggcagcctgttcctgacctggaaaccggaaatgggctggtacgccgaa
accggtctgactctggtgggccagcgttacgccgacaacctcaacaccactgtgctgcca
ggttatggccgctgggatgccttggctgggttccggcagaaggattgggatttgcgcgct
gcgctgaacaacatcagcgacaagacctattattcttcggccaccagtgcggcgcagatt
cagccgggtgaaccgcgcagcgtggtcgtgaccgggacctacagcttctaa
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