Pseudomonas frederiksbergensis: PFAS1_09925
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Entry
PFAS1_09925 CDS
T04786
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PFAS1_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
APV39651
LinkDB
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Position
2138362..2140686
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AA seq
774 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRY
LRELDERRISIFASIQEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPTLTPDAEAARFVDAEKGVADVKAALEGAKYILMERFAEDAGLLDKLRS
YLKQEAILSARVIAGKEEEGSKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGAMHPCEGMIGQQFGIQNQNRAADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLSAPAGPRATLGLDPGLRTGCKVAVVDSTGKLLDHATVYPHVPHN
KWDQTIAILAALCAKHAVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP
KKYTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLELGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQNTAPRKETTAAAPANNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggcgtccgcccacaacaggtcgaa
gcggccgtcgcgctactcgatgaaggctccacggtgcctttcatcgcccgctaccggaaa
gaagtgaccggcagcctcgatgacatccagttgcgtcatctggaagagcgtctgcgctac
ctgcgagaactcgacgaacggcgcatcagcatcttcgccagcattcaagagcagggcaaa
ctgaccccgcaactcgaacgcgacatcaagctcgccgacaccaagacccgcctcgaagac
ttgtacctgccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgacggcctgttcaacgacccgaccctgacgccagacgccgaagcc
gcgcgcttcgtcgatgccgaaaaaggcgtcgccgatgtgaaggccgccctcgaaggcgcc
aagtacatcctgatggagcgcttcgccgaagacgccggcctgctggacaagctgcgcagc
tacctcaagcaggaagccatcctcagcgcccgcgtcatcgccggcaaagaagaggaaggc
tccaagttccgcgactacttcgaacacgatgaaccgctcaaaagcatgccgtcgcaccgc
gcgctggcgattttccgtggccgcaacgaaggcattctgagttcggcgctgaaagtcggc
gacgaacttccgggcgccatgcacccatgcgaaggcatgatcggccagcaattcggcatc
cagaatcagaaccgcgccgccgacaaatggctcggcgaagtggtgcgctggacctggaag
gtcaagctctacacccacctcgaaaccgacctgctgggcgaactgcgcgacggcgcagaa
accgaagcaatcaacgtgttcgcccataacctgcacgacttgctgctgtcggcgccggct
ggtcctcgcgccacattgggtctcgacccgggcctgcgtaccggttgcaaggtggccgtg
gtcgattccaccggcaagctgctggatcacgccacggtttacccgcacgtgccgcacaac
aagtgggaccagaccatcgcgattctggcggccctgtgcgccaagcatgccgtggacctg
atcgccatcggcaacggcaccgccagccgtgaaaccgacaagctggccgctgagctgatc
aaaaaataccccgccatgaagatgaccaaagtcatggtctccgaggccggcgcatcggtt
tactcggcgtcggaactggcctccaaggaattcccggacctcgacgtgtcgatccgtggc
gcggtgtcgattgcccgtcgcctgcaggatccactggctgagctggtgaagatcgatccg
aaatccatcggcgtcggccagtaccagcacgacgtgtcgcagctgaaactggcacgcggc
ctggacgcggtggtcgaagactgcgtaaacgccgtgggcgtcgacgtcaatacagcctcc
gtggcgctgctggcccgtatctccggcctcaacgcaacgttggcgcaaaacatcgtcagc
caccgcgacgagcacggcgcgttcaaaacccgtgctgcattgaagaaagtcgcgcgtctg
ggcgagaaaaccttcgaacaggccgctggcttcctgcgcgtcatgaacggtgacaacccg
ctggattcgtctgcggttcacccggaagcctatccgctggtccagcgtattgctgctgag
accgaccgcgacattcgctcgctgatcggcgacgccagcttcctcaagcgtcttgatccg
aaaaagtacaccgacgaaaccttcggtctgccaacggtcaccgacatcctgcaagagctg
gaaaaacctggccgcgacccacgtcccgagttcaagaccgccgagttccaggaaggcgtt
gaagacctcaaggacctggagctggggatgatcctcgaaggcgtggtgaccaacgtgacc
aacttcggtgctttcgtcgacatcggcgtgcatcaggacggtttggtgcacatctctgcg
ctttcggagaagttcatcaaggatccgcgtgaagcggtgaaggccggtgacgtggtgaaa
gtgaaggtcatggaagtcgacatcccgcgcaaacgcgttggcctgtcgatgcgcatgagc
gacacaccgggcgagaaaatcgacggcgcccgtggtgcacgtccgggttcggcgccacgc
cagtcccagaacaccgcgccgcgtaaagaaaccacggcggcagccccggccaacaacgcc
atggcttcgctgttcgccaacgccaagcaattgaagaaacgctga
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