Pseudomonas frederiksbergensis: PFAS1_10895
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Entry
PFAS1_10895 CDS
T04786
Name
(GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein RimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfk03009
]
PFAS1_10895
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_10895
Enzymes [BR:
pfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
PFAS1_10895
Ribosome biogenesis [BR:
pfk03009
]
Prokaryotic type
Other maturation factors
PFAS1_10895
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PFAS1_10895
Prokaryotic type
PFAS1_10895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Amanitin
Motif
Other DBs
NCBI-ProteinID:
APV39828
LinkDB
All DBs
Position
complement(2357908..2358465)
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AA seq
185 aa
AA seq
DB search
MVNSWRVQQAARAIRAGAVIAYPTEAVWGLGCDPWDEEAVYRLLAIKGRSVEKGLILVAD
NIRQFDFLFEDFPELWMDRMASTWPGPNTWLVPHQNMLPQWITGVHETVALRVSDHPLVR
DLCAVVGPLVSTSANPQGQLAARTRIRVEQYFRGQVDYVLGGNLGGRKNPSVIRDLATGN
VIRPD
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacagttggcgtgtgcaacaagccgcacgagccattcgcgcaggcgcggtgatt
gcctacccaaccgaagcggtctggggtctgggttgcgacccgtgggacgaagaggcggtc
tatcgtctgctggcgatcaaggggcggtcggtggaaaaagggttgatcctggtggccgac
aacattcgccagttcgacttcctcttcgaagactttcctgaattgtggatggatcgcatg
gccagcacctggccagggccgaacacctggctggtgccgcatcagaatatgttgccccag
tggattaccggcgtgcatgaaacggtggcattgcgggtcagcgatcatccgttggtacgg
gatttgtgcgcggtagttgggccgttggtttcaacgtcggccaacccgcagggccaactg
gcggcgcggacgcggattcgcgtcgagcagtatttccgtgggcaggtcgattacgtgttg
ggtgggaatctgggtgggcgcaagaatccgagcgtgattcgcgatctggcgacgggcaac
gtcatccgcccggattaa
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