KEGG   Pseudomonas frederiksbergensis: PFAS1_11080
Entry
PFAS1_11080       CDS       T04786                                 
Name
(GenBank) restriction endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pfk  Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pfk02048]
    PFAS1_11080
Enzymes [BR:pfk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PFAS1_11080
Prokaryotic defense system [BR:pfk02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PFAS1_11080
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 Helicase_C AAA_11 SNF2-rel_dom nSTAND3 AAA_34 SLFN-g3_helicase AAA_19 AAA_22 DUF87
Other DBs
NCBI-ProteinID: APV39861
LinkDB
Position
complement(2402806..2405169)
AA seq 787 aa
MDKKSLTERDICTKFIAPAIQLAGWDIQKQVREEVSFTKGRIIVRGKLHSRGESRRADFI
LYHQANLPIAVIEAKDNKHDIGSGMQQALGYAESLDVPFVFSSNGDGFLFHDRTGTGTQV
ETELGLDQFPSPDELWQRYCQWKGLNGDARKKVESPYYDDGSGRMPRYYQTNAINRTVEA
VAKGQSRILLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNILVDQTKNNDFKPFG
QAMTKIAKRQIDTSYEIYLSLYQAVTGTEEEMNVYKQFSRDFFDLIVIDECHRGSAAEDS
AWREILDYFSSSTHVGLTATPKETKEVSSITYFGEPVFSYTLKQGIEDGFLAPYKVVRID
FDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIEARTQLVAQKVTEFLKATDPFQ
KTIIFCDDINHAERMRQALVNLNPQRIAENRKYVMRITGDDQEGKAELDNFINPEERYPV
IATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFKKAT
ELFADPAFDGDPVVIYAPEGEESPVPPDDLATDEDGITAGTTAEIDDLEFTGDDDKKRIK
YIIDSVPIYVIAERVQYYGPDGRLITESLHNYTRVCVQKQFASLDDFLRRWSDADQKKVI
IEEMAAQGVMWEALAEEVEKKQRKTLDPFDLVCHVAFDQPALSRMERAEQVKKRNYFGKY
SGAARQVLEALLDKYADTGIEHIEDIKILQLDPFSQIGAPIELVKAFGGKAGYNKAIHEL
EDELYAS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggacaaaaagtcgcttaccgagcgggacatttgcaccaagttcatcgcgcctgcgatc
cagttagccggctgggatatccagaagcaagtacgcgaagaagtcagctttacaaaagga
cgcatcatcgtccgtggcaaattgcacagccgtggcgagtcccgccgtgccgactttatt
ctctaccaccaggccaacctgccgatcgctgtcatagaagcgaaagacaacaaacacgat
atcggctctggcatgcagcaagccctcggttatgccgagtcactggacgtaccgttcgtg
ttctccagtaacggcgatggctttctattccacgaccgtaccggcaccggtactcaggtc
gaaactgagctgggccttgaccagttcccctctcctgacgagctgtggcagcgctattgc
caatggaaaggtttgaacggtgatgcccgtaaaaaggtcgagtcgccctactacgatgac
ggctctggacgcatgccgcgttattaccaaaccaacgcgatcaaccgtaccgtcgaggcg
gtggccaaggggcagtcacgcatcctgttggtcatggccaccggtacaggcaagacctac
accgccttccagattatctggcggctgtggaagtccaagcagaaaaagcgaattctcttc
ctggccgaccgcaacatcctggtcgaccagaccaagaacaacgacttcaagcccttcggc
caggcgatgaccaagatcgccaagcgtcagattgatacctcttacgagatttacctgtcg
ctctatcaggccgtgacgggcactgaagaagaaatgaacgtctacaaacagttttcccga
gacttcttcgacctgattgtgatcgacgaatgccaccgtggcagtgccgccgaggattcc
gcttggcgcgagattctcgactacttctccagctccacccatgtcggcctcaccgccaca
ccgaaggaaaccaaagaggtgtccagcattacctacttcggtgagccggtgttcagctat
acgctcaagcagggcatcgaagacggcttcctcgcaccttataaagtggtgcgcatcgac
ttcgacaaggatctccaaggctggcggccacccaagggcatgctcgacaaaaatggcgag
ctgatcgaagaccgcatctacaacctcaaggacatggaccgcaccctggtcattgaggcg
cgcacccaactggtggcgcaaaaggtcaccgaatttctcaaggccaccgacccgttccag
aagaccatcatcttctgcgacgacatcaaccatgccgagcgcatgcgccaggcgctggtc
aacctcaacccgcagcgcattgccgagaaccgcaagtacgtcatgcgcattaccggggat
gaccaggaaggcaaagccgagctggacaacttcatcaacccagaagagcgttacccagtc
attgccaccactagcaagttgatgactactggcgttgatgcccagacctgcaagctgatt
gtgctcgaccagcacatcaagtcgatgaccgagttcaagcagatcatcgggcgtggcacc
cgcatcaatgaagacttcggcaagtactggttcaccatcatggacttcaagaaggccacc
gaactgtttgccgatccggctttcgatggtgaccccgtcgtgatctatgccccggaaggt
gaagagtctcccgtaccacctgatgacctggcgacggatgaagatggcatcaccgctggc
accacggcagaaatcgacgaccttgagttcaccggtgatgatgacaaaaagcgcatcaaa
tacatcatcgacagcgtcccgatctacgtcatcgccgaacgtgtgcagtactacggcccg
gatggccggctgatcactgaatccctgcacaactacacccgtgtctgcgtgcaaaagcag
ttcgcctcgctggacgactttctgcgtcgctggagcgatgccgatcagaagaaggtcatt
atcgaggaaatggccgcccagggtgtgatgtgggaagccttggccgaggaagtggaaaag
aaacagcgcaagactctcgacccgttcgacctcgtctgccatgtggctttcgatcaacct
gcgctttcccgcatggagcgcgccgagcaggtgaaaaaacgcaactatttcggtaagtat
tcaggcgctgcgcgccaagtgctcgaagcattgctcgacaagtatgccgacaccggcatc
gagcatatcgaagacatcaagatcctccagctcgatcccttcagccagatcggtgcgcct
atcgagctggtcaaggcgtttggcggcaaggcgggttacaacaaagccatccatgaactg
gaagatgagctctacgccagttaa

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