Pseudomonas frederiksbergensis: PFAS1_11410
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Entry
PFAS1_11410 CDS
T04786
Name
(GenBank) diguanylate cyclase
Organism
pfk
Pseudomonas frederiksbergensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS_4
PAS
PAS_8
PAS_7
CREPT
DUF7525
PAS_PdeA
Filament
Motif
Other DBs
NCBI-ProteinID:
APV39923
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All DBs
Position
2478089..2480962
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AA seq
957 aa
AA seq
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MTLSTDLSGPVVEPRVIRKQYAMEMAVERTRLLYQGSLLPTLFMLINGLVCAGLLWSPQR
YFLVSVWLVWLLSLVALRVIQVAAFDSAIPNRQAHPIWRRMFLLGSAMTGLTLAGAGIAL
VPVDNFMQQAWVFGLIGAAALSASVAYAVSLPAFLSFTLPCLLPAIGYLFWGGDEQSQGW
GWFGLILLGALSVVAWQVNRLINNGLLRRFQNQALIEHLQQAQNCSDQLNQKLAKEIDQR
RRAEDELRQIQIELESRVAQRSLELDAANQALSKSEARLALALKASELGLWDWNLQTDEV
HHTQLQELFGLEPELVTAMLRHLKPRLHPDDLPSLKRALVEHLKGRSDDYQIEYRVRHGD
GHWVWIEDRGRAVERGENGRVIRMVGTRRDISVSKALEEQQQLAATVFEAASEGIVIFDP
NYALIAVNQAFSRVTGYDTDDMIGRNVVELPCSRDARRHYAAIRQALEQHGSWQGELVET
RKNGELYPQWLQLNAVRDARGNVSHIVGFFADLSARRESEERMRYLAHYDELTGLANRSL
FRERLNEAHQRVRQGGYRSLALLHINLDRFKLLNDSLGHEIADQLLQKMARRLVNALPEA
DTIARLSGDEFAVLFNAYGNLSSLARVATRLSSKLRLPITVEGHELVVSASMGISLLPDN
AREISALVHQSNMAMQHAKHLGGNNFQFYTDSLQASTLERLQLENQLRKAIEEKQLKVFY
QPKLCLATGRLNAAEALVRWDHPTMGRVPPGDFIGLAEETGLIGPIGEFVLRQACWQACE
WQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEETGLAPHYLELELTESQLLDSVEHII
ATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLGEGSEDAAITRAII
AMAHGLSLKVVAEGVERAEQLAFLKAEHCDEVQGYLISRPVEADGLAALLRADAKPL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcagcaccgacctgtcgggccccgttgtggaaccccgggttatccgcaaacag
tacgccatggaaatggcggtcgaacgcacgcgtctgctttatcagggctcgttgctgccc
acgttattcatgttgatcaacggtctggtctgcgctggcttgctttggagcccgcagcgc
tacttcctggtcagcgtctggctggtgtggctgttgtcgctggtggcgctgcgggtgatt
caggtcgcggccttcgattcggcgatacccaaccgtcaggcccatccgatctggcgccgc
atgtttttgctgggttcggccatgaccggcctgaccctggccggcgccggcattgcgctg
gtgcccgtcgataacttcatgcaacaagcctgggtgttcggcctgatcggcgccgccgcc
ctttcggccagcgttgcctatgccgtcagtctgccggcgttcctgtcctttaccttgcct
tgtctgttgccggccattggctatctgttctggggcggcgatgaacaaagtcagggctgg
ggctggtttggtctgattttgctcggcgcgttgagtgtggtcgcctggcaggtcaatcgg
ctcatcaataacggtctgttacggcgcttccagaatcaggcgttgatcgaacacttgcag
caggctcaaaactgcagcgaccagctcaatcaaaagctggccaaggaaatcgaccagcgt
cgtcgtgccgaagacgagttgcggcaaattcagatcgagctggaaagccgcgtcgcccag
cgcagcctggaactggatgccgccaaccaggccctgagcaagagtgaagcgcgtctcgcc
ctggcgttgaaggccagtgagttgggcttgtgggactggaacctgcaaaccgatgaagtt
catcacacccagcttcaggagctgtttggcctggaaccggaactcgtgacggcaatgctt
cgccacctcaagccgcggctgcaccccgatgacttgccgtcgctcaagcgcgcgctggtc
gagcatttgaaaggccgcagcgacgactatcagattgagtaccgcgtccgccacggcgat
ggccactgggtctggatcgaagaccgaggtcgggcagttgagcgcggtgagaatggccgg
gtgatccgcatggtcggcacccgtcgcgacatcagcgtcagcaaggctctggaagagcaa
cagcaactggccgcaacggtgttcgaagccgccagtgaaggcatcgtgattttcgatccg
aattacgcgttgatcgcggtcaatcaggccttcagccgggtcaccggctatgacactgac
gacatgatcggacgcaacgtggtcgagttgccttgcagccgcgatgctcgccgacactac
gctgcgattcgtcaggcgctggagcagcacggcagttggcagggcgagttggtcgaaacc
cgcaagaatggcgagttgtatccgcaatggttgcaactgaacgcggtgcgcgatgctcgg
ggaaatgtaagccatatcgtaggcttcttcgccgatctatcggcccggcgcgaatccgag
gagcgcatgcgttacctggcgcattacgatgaattgacggggctggctaaccgttcactg
ttccgcgagcggctaaacgaggctcatcagcgggtgcgccagggcggttaccgcagtctg
gcgttgctgcacatcaatctggaccgtttcaagctgctcaacgacagccttggccatgaa
atcgccgaccagctcttgcagaaaatggcccggcggctggtcaatgcgttgcctgaagca
gacaccatcgctcgcttgtccggcgatgagtttgccgtgttgttcaatgcctacggcaac
ctgtcgagcctggcgcgggtggcgacccgactgtcgtccaagctgcgtttgccgatcact
gtcgagggccatgaactggtggttagcgcgtccatgggcatcagtctgttgccggacaac
gcgcgagaaatctccgcgctggttcatcagtccaacatggcgatgcagcatgccaagcac
ttgggcggaaataacttccagttttacaccgacagcctgcaagccagcacgctggagcgt
ttgcagctggaaaatcagctgcgtaaggccatcgaagagaagcagttgaaggtgttttac
caaccgaagctgtgcctcgccacggggcggttgaatgccgccgaagcgctggtgcgctgg
gatcatccaacgatgggccgtgtgccgccaggggacttcatcggcctggccgaggaaacc
gggttgatcggcccgatcggcgagttcgtgttgcgtcaggcctgctggcaagcctgcgag
tggcagcgtcagggacttgcgccgattcgggtgtcggtgaatctgtcggtgcatcaattg
cgtcagggcaaactggttagcctggtgcgtcaggtgctggaagaaaccggtctggcgccg
cactacctcgagctggaactcaccgaaagccagttgctggacagtgtcgagcacatcatc
gcgaccttccagcaattgcgtgatttgggggtcaagttggcgattgatgacttcggcacc
gggtattcgtccctgagttacctcaagcgcatccctgtggattacgtaaagatcgatcag
gcatttattcgcggtctgggggaggggagcgaggatgcggcgatcacccgggcaatcatt
gccatggcgcacggcttgtcgctcaaagtggtggccgagggtgtggagcgggcagagcag
ttggcgtttttgaaagccgagcactgcgatgaagtgcagggctatttgattagccgcccg
gtcgaggccgatggcctggcggcgctgttgcgtgcggacgcgaaacccttgtaa
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