Pseudomonas frederiksbergensis: PFAS1_11685 Help Entry PFAS1_11685       CDS       T04786                                  Name (GenBank) ClpV1 family T6SS ATPase   KO K11907   type VI secretion system protein VasG Organism pfk  Pseudomonas frederiksbergensis Pathway pfk02025   Biofilm formation - Pseudomonas aeruginosa pfk03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pfk00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     PFAS1_11685  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     PFAS1_11685  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pfk02044]     PFAS1_11685 Secretion system [BR:pfk02044]  Type VI secretion system   Imp/Vas secretion system core components    PFAS1_11685 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Zeta_toxin AAA_25 Sigma54_activat nSTAND3 TniB AAA_7 ATPase_2 NACHT AAA_14 Torsin AAA_18 Hpr_kinase_C Clp_N SRP54 CbiA NBD_SMAX1 Motif Other DBs NCBI-ProteinID:  APV39973 LinkDB All DBs Position complement(2543562..2546240) Genome browser AA seq 892 aa AA seqDB search MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRLIRQF NIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG ILKTPSLRHGLLGLSAEFDKIKVEALSERFDEYVGDSPENALSASDGFNASSVPGEASGA MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIVIGARQTNSENL LAAERERLAELESRWAEEKTLVDELLATRATLRESVGVVDRDVGSEDSHALREKLVDLQQ RLSALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMS EFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFD KGVMEDGEGRVIDFKNTLILLTTNAGTDLIAQVCKDPQNVPEPEEIAKALRQPLLEIFPP ALLGRLVTIPYYPLNDDMLKAITRLQLNRIKKRVENTHKVAFDYDDAVIDLIVSRCTETE SGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISARDNELHYDFSDAA NT seq 2679 nt NT seq  +upstreamnt  +downstreamnt atgggtgaaatcagtcgcgccgcgttgttcggcaaactcaacagcgtggcctacaaagcc atcgaagccgccaccgtattctgcaaactgcgcggcaacccttatgtggaactggcccac tggtttcatcagttgctgcaattgcaggactcggacctgcaccgcctcatccgccagttc aatatcgagccggcacgcctggcccgggacctgaccgaagccctggaccgtttgccacgg ggctcgacttctatcactgacttgtcctctcatgtggaagaagccgtggaacgtggctgg gtctacggcagcctgatgttcggcgaaagccaggtgcgtaccggttacctggtgttgggc atcctcaagacaccgagtctgcgccacgggctgctcgggctgtcggcagagttcgacaaa atcaaggtcgaggccctgagcgagcgttttgacgaatacgtcggtgactcgccggaaaat gcgctcagcgccagcgacggtttcaacgccagcagcgtgcccggtgaagccagcggcgcc atggcccccagcgccatgggcaagcaggaagcactcaagcgttttaccgtcgatctcacc gagcaggcccgcagtggcaagcttgacccgattgtcgggcgtgacgaagagatccgccaa ctggtggacatcctcatgcgccgtcggcagaacaacccgattctgaccggtgaagccggc gtcggtaaaaccgccgtggttgaaggttttgccctgcgcattgtcgccggtgatgtaccg ccagcgcttaaagacgtggaactgcgcagcctcgacgtcggcctgttgcaggccggcgcg agcatgaaaggtgaattcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg ccaaaaccgatcatcctgtttatcgacgaagcccacacgctggtcggtgccggtggcgcc gccggcaccggggacgcggccaatttgctcaagccagccttggcccggggcaccctgcgc accgtggccgccaccacctgggccgagtacaaaaaacatatcgagaaagacccggccctg acccgccgcttccaggtggtgcaagtcgccgagccgtccgaagacaaggcgctgttgatg atgcgcggcgtggcctcgaccatggagaaacaccatcaggtgcagatcctcgacgaagct ctggaagcctcggtcaagctgtcccatcgctacatcccggcgcgccagttgccggacaaa tccgtgagcctgctggacaccgcttgcgcccgggtcgccatcagcctgcacgccgtgccg gccgaagtggacgacagccgtcgccgcatcgaggcgctggaaaccgaactgcaaatcatc gcccgcgagcacgccatcggcatcgtcatcggcgcccgtcagaccaacagcgaaaacctg ctggccgccgagcgcgaacgcctggccgaactcgaaagccgctgggccgaagagaaaacc ctggtggacgaactgctcgccacccgcgccaccctgcgcgaaagcgtcggcgtggtagac cgcgacgttggcagtgaagacagccacgctctgcgcgagaaactggtggacctgcaacag cgtctgagcgctctgcaaggggaaaccccgttgattctgccgacggtcgattaccaggcc gtggcctcggtggtcgccgactggaccggtatcccggtgggccgcatggcccgtaacgaa ctggaaaccgtgctcaacctcgaccagcacctgaagaagcgcatcatcggccaggaccat gccttgcagatgatcgccaagcgcatccagacctcccgcgccggcctcgacaatccgagc aaaccgattggcgtgttcatgctcgcgggcacttccggcgtgggcaagaccgaaaccgcc ctggccttggccgaagccatgtacggcggcgagcagaacgtcatcaccatcaacatgagc gaattccaggaagctcacaccgtgtccaccctcaagggcgcgccaccgggctacatcggc tatggcgaaggcggcgtgctgaccgaagccgtgcggcgcaaaccctacagcgtggtgctg ctggacgaggtggaaaaagcccacccggacgtgcatgagatcttcttccaggtcttcgac aaaggcgtgatggaggacggtgaaggccgggtgatcgacttcaagaacaccttgatcctg ctgaccaccaacgcgggtaccgatctgattgcccaggtctgcaaagacccgcaaaacgtg cccgagcccgaagaaatcgccaaggccctgcgccagccgctgctggagattttcccgccg gcattgttgggccgcctggtgaccattccgtactacccgctcaacgacgacatgctcaag gccattacccgcctgcaactcaaccgcatcaaaaagcgcgtggagaacacccataaagtg gccttcgactacgacgacgcggtgatcgacctgatcgtctcccgctgcaccgaaaccgaa agcggcgggcggatgatcgacaccatcctgaccaacagcctgttgccggacatgagccgc gagttcctcacccgcatgctcgaaggcaaagcgctggcaggcgtacggattagcgcccgg gataacgaattgcactacgacttcagcgacgcggcctga

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