Pseudomonas frederiksbergensis: PFAS1_11750
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Entry
PFAS1_11750 CDS
T04786
Name
(GenBank) type VI secretion system-associated protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFAS1_11750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfk02044
]
PFAS1_11750
Secretion system [BR:
pfk02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFAS1_11750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
APV39986
LinkDB
All DBs
Position
2557312..2558646
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIISARGLLPDGTPFNIPQDDLAPSPLNVDDNLRDGLVYLALPLKRAGARDTVDDGETLG
AARYVSQVREVRDDNAPFENRAPVAVGSRALRLLIAEDGISDYAAIGLVRIKEKRADRAL
VLDDTYIPPLLDVSAAKPLAAFRSEMLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFYSELVSLAGEFSTFTASGRRPQEYPQYQHDNLALSFAP
VMQALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLDSASFILVVRADVPAETLRG
HFGQQSKVGSVEHIRNLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSEHWQQLAN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggaacaatcgcgtggtctggtcagaaggcatgttcattggaacgcagcacttc
caacagcatgaccgttacctggaaaacctcatcgacgcccgaagccgcccgttatcggcc
ggcgcctggggtttctccgaattgctgatcgatcagggcctgttggcccagggcaaactg
gcaatcatctcggcgcgggggctgttgccggacggcacgcccttcaacattccccaggat
gacctggcgccgagcccactgaatgtcgacgacaacctgcgcgatggcttggtgtacctg
gccttgccgctcaagcgcgccggtgcccgggacaccgttgatgacggcgaaaccctgggc
gctgcgcgctacgtgagccaggtgcgcgaagtacgcgacgacaacgcaccgttcgaaaac
cgtgcgccagtggccgtgggttccagggcgctgcgattgttgattgccgaggatggcatc
agcgactacgccgccatcggcctggtacgaatcaaggagaaacgcgccgaccgcgccctg
gtgctcgacgacacttacatcccgccgctgctggatgtctccgccgccaaaccgctggcc
gcgtttcgcagcgaaatgctgggcctgctgcaccaacgtggcgaagccctcgccgggcgg
gtggtggcgtccggtgccggcggtgcctcggaaattgccgacttcatgctgctgcaactg
gtcaaccgcgctcagccgttgatccagcacttgagccagttgagtccgttgcaccccgag
cggttctacagcgaactggtgagcctggccggcgagttctcgacctttaccgcttccggg
cggcgaccgcaggaatacccgcagtaccagcacgataacctcgcgctgagttttgcgccg
gtgatgcaagccttgcgtgaagcgctgtcgatgttgatcgacagcaaggccacgccgatt
ccgattgtcgaaaaagcctacggcgtgcatgtggcgatgctggccgacaagaccctgctc
gacagcgccagcttcatcctggtggtgcgcgccgacgtgcccgccgaaaccctgcgcggt
cacttcggccaacagagcaaggtcggctcggtggagcacatccgcaacctggtcaacctg
caattgccgggcattggcctgctgccgctgccggtggcaccacggcaacttccttatcac
gccggctccacctattacgaactggaccggggcagcgagcattggcagcaactggccaac
tccggcggttttgcgttccacatcgcggggcagttcccggggttgaacctggctttctgg
gcgatccgaggataa
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