Pseudomonas frederiksbergensis: PFAS1_11945
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Entry
PFAS1_11945 CDS
T04786
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02010
ABC transporters
pfk02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFAS1_11945
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PFAS1_11945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_11945
Transporters [BR:
pfk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PFAS1_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
APV40024
LinkDB
All DBs
Position
complement(2598595..2600181)
Genome browser
AA seq
528 aa
AA seq
DB search
MRLAALPLLLAPLLLSPLAHAAALSVCTEASPEGFDVVQYNSLTTTNASADVLMDRLVDF
DTASGKVIASLADSWEVTPDGLTYVFKLHPRVKFHRTEYFSPTRELTAEDVKFSFDRMLD
PANPWHKVAQSGFPHAQSMQLPALIKKIDALDPLTIRFTLDHPDSTFLATLSMGFASIYS
AEYADKLMKAGTPEKLNSQPIGSGPFIFTRFQKDASIRYKANPDYFRGKPSVDPLIFAIT
PDANVRLQKLRRNECQIALSPKPLDVQAALKEPTLKVEKTDAFMTAFVGINSQHPPLDKP
EVRQAINLAFDKTNYVKAVFEDTAEPANGPYPPNTWSYAKGLPGYSHDVEKAKALMAKAG
LKDGFKTTIWTRPSGSLLNPNPSLSAQMLQSDLAEIGIQAEIRVIEWGELIRRAKAGEHD
LLFMGWAGDNGDPDNFLTPQFSCAAVKSGTNFARYCNQDLDKLISAGKTTGEQGVRTKLY
EQAQAQIQQQALWLPLAHPTAFALTRKDVQGYQVSPFGRQDYSKVNLK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgctgccctaccgctgttgctcgcccctcttctgctgagcccgctggctcat
gccgccgctctgagcgtttgcaccgaggcaagcccggaagggttcgacgtggtgcaatac
aactcgctgaccaccaccaatgcttcggccgacgtgctgatggaccgtctggtggacttc
gatacagccagcggcaaggtgatcgccagcctcgcggacagctgggaagtcacgcccgat
ggcctgacgtatgtgttcaagcttcacccacgggtgaaattccaccgcactgaatacttt
agcccgacgcgtgagctgaccgccgaggacgtgaaattcagcttcgaccgcatgctcgac
ccggccaacccatggcacaaggtcgcccagagcggattcccgcatgcccagtcgatgcaa
ttgcctgcattgatcaagaagatcgacgcactggacccgctgaccatacggttcaccctc
gaccacccggattcgactttcctcgcgaccctgagcatgggcttcgcctcgatctactcc
gccgaatatgccgacaaactgatgaaggccggcaccccggagaagctcaacagccagccg
atcggcagcggtccgttcatctttacgcgtttccagaaagacgcctcgattcgctacaag
gccaacccggattacttccgtggcaagccttcggtggacccgctgattttcgccattacc
cccgacgccaacgtgcggctgcagaaattgcgccgcaacgaatgccagatcgccctgtcg
cccaagcctctggacgtacaggcagcgctgaaagaaccgaccctgaaagtggaaaagact
gacgccttcatgaccgcgttcgttggcatcaacagccagcatccgccgctggacaagcct
gaagtgcgccaggccatcaacctcgcattcgacaagaccaactacgtcaaagccgtgttc
gaagacaccgccgaacctgccaacggtccatacccgccgaacacctggagctatgccaaa
ggcctgccgggttactcgcacgacgtcgaaaaagccaaagcactgatggcgaaggccggg
ctcaaggacggtttcaagaccaccatctggacccgcccttctggcagcctgctcaacccg
aatccgagcctcagcgcgcaaatgctgcaatcggacctcgcggaaatcggcattcaggcg
gaaattcgggtgatcgaatggggcgagctgattcgccgcgccaaggccggtgaacacgat
ctgttgttcatgggctgggcgggcgacaacggcgacccggacaacttcctcacgccgcag
ttttcctgcgccgcggtcaagtccggcaccaacttcgcgcgctactgcaaccaggacctg
gacaagctgatcagcgccggcaagaccaccggcgagcaaggtgtgcgcaccaagctctac
gaacaggcccaagcacagatccaacagcaggcgctgtggctgccgctggcccacccgacc
gccttcgcactgacgcgcaaggatgtgcagggctaccaggtcagtccgtttggccggcag
gactactcgaaggtcaacctaaagtaa
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